Salmonella enterica subsp. enterica serovar Agona USDA-ARS-USMARC-76341 |
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Putative Salmonella enterica subsp. enterica serovar Agona USDA-ARS-USMARC-76341 RM systems
Ref: Nguyen,S.V. et al. unpublished
REBASE ref # 29022
Complete sequence: 4,841,410 bp
GenBank #: CP025453
REBASE acronym: Sen76341
Org_num: 35654
All begin CYL30_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24150 | toll/interleukin-1 receptor domain-containing | |||
| 24155 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen76341ORF24155P |
| 24160 | M | M2.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M2.Sen76341ORF24155P |
| 24165 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen76341ORF24155P |
| 24170 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen76341ORF24155P |
| 24175 | Fic family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5495 | phosphohydrolase | |||
| 5500 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen76341DcmP |
| 5505 | V | V.StyUK1DcmP (100% identity) | V.Sen76341DcmP | |
| 5510 | drug/metabolite exporter YedA | |||
| 14070 | phage portal protein | |||
| 14075 | R | SenS16ORF16875P (100% identity) | CGGCCG | Sen76341ORF14080P |
| 14080 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.Sen76341ORF14080P |
| 14085 | 62 aa hypothetical protein | |||
| 14095 | replication endonuclease | |||
| 14100 | M | M.SenSH7ORF6070P (100% identity) | M.Sen76341ORF14100P | |
| 14105 | 75 aa hypothetical protein | |||
| 18105 | Fis family transcriptional regulator | |||
| 18110 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen76341ORF18110P |
| 18115 | DUF2556 domain-containing protein | |||
| 18625 | ribulose-phosphate 3-epimerase | |||
| 18630 | M | M.StyTDamP (100% identity) | GATC | M.Sen76341DamP |
| 18635 | cell division protein DamX | |||
| 24085 | 97 aa hypothetical protein | |||
| 24090 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen76341ORF24090P |
| 24095 | DUF87 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1850 | MFS transporter | |||
| 1855 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen76341ORF1855P |
| 1860 | R | SenS12VPHORF9140P (100% identity) | CAGAG | Sen76341ORF1855P |
| 1865 | 33 aa hypothetical protein | |||