Salmonella enterica subsp. enterica serovar Typhimurium 14028 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium 14028 RM systems
Ref: Chen,H. unpublished
REBASE ref # 20595
| Sequence length: | GenBank #: | |
| Chromosome: | 4,870,261 bp | CP034479 |
| plasmid unnamed: | 93,832 bp | CP034480 |
REBASE acronym: Sen14028
Org_num: 22987
All begin EJJ31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20830 | restriction endonuclease | |||
| 20835 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen14028ORF20840P |
| 20840 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen14028ORF20840P |
| 20845 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen14028ORF20840P |
| 20850 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1845 | cell division protein DamX | |||
| 1850 | M | adenine-specific DNA-methyltransferase | GATC | M.Sen14028DamP |
| 1855 | ribulose-phosphate 3-epimerase | |||
| 2340 | DUF2556 domain-containing protein | |||
| 2345 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen14028ORF2345P |
| 2350 | DNA-binding transcriptional regulator Fis | |||
| 9555 | PerC family transcriptional regulator | |||
| 9560 | M | M.StyUK1V (100% identity) | GATC | M.Sen14028ORF9560P |
| 9565 | RusA family crossover junction | |||
| 9805 | phosphohydrolase | |||
| 9810 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen14028DcmP |
| 9815 | V | very short patch repair endonuclease | V.Sen14028DcmP | |
| 9820 | drug/metabolite exporter YedA | |||
| 14115 | DUF550 domain-containing protein | |||
| 14120 | M | M.Sens29958ORF6205P (100% identity) | M.Sen14028ORF14120P | |
| 14125 | ead/Ea22-like family protein | |||
| 21010 | BREX system P-loop protein BrxC | |||
| 21015 | RM | StyUK1IV (100% identity) | GATCAG | Sen14028ORF21015P |
| 21020 | ATP-binding protein | |||
| plasmid unnamed | ||||
| 24785 | 73 aa hypothetical protein | |||
| 24790 | M | M.StyUK1ORFAP (100% identity) | M.Sen14028ORF24790P | |
| 24795 | 62 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18600 | 33 aa hypothetical protein | |||
| 18605 | R | StyUK1IP (99% identity) | CAGAG | Sen14028ORF18610P |
| 18610 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen14028ORF18610P |
| 18615 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20825 | BrnT family toxin | |||
| 20830 | R | StyUK1MrrP (100% identity) | Sen14028MrrP | |
| 20835 | type I restriction-modification system | |||