Klebsiella pneumoniae KpvST147B_SE1_1_NDM |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Klebsiella pneumoniae KpvST147B_SE1_1_NDM RM systems
Ref: Turton,J.F. et al. unpublished
REBASE ref # 28874
| Sequence length: | GenBank #: | |
| Chromosome: | 5,433,031 bp | CP040724 |
| plasmid pKpvST147B_5: | 112,707 bp | CP040729 |
| plasmid pKpvST147B_NDM-1: | 53,955 bp | CP040728 |
| plasmid pKpvST147B_virulence: | 339,117 bp | CP040726 |
REBASE acronym: KpnNDM
Org_num: 34951
All begin FGF03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17475 | DUF4102 domain-containing protein | |||
| 17480 | R | Kpnr99ORF22815P (99% identity) | CGANNNNNNNNTGCC | KpnNDMORF17485P |
| 17485 | M | M.Ksp4251ORF22010P (100% identity) | CGANNNNNNNNTGCC | M.KpnNDMORF17485P |
| 17490 | S | S.Ksp4251ORF22010P (100% identity) | CGANNNNNNNNTGCC | S.KpnNDMORF17485P |
| 17815 | endoribonuclease SymE | |||
| 17820 | S | S.Kpnst65ORF21505P (100% identity) | GAAYNNNNNNNCTGG | S.KpnNDMORF17825P |
| 17825 | M | M.Ksp4251ORF21690P (100% identity) | GAAYNNNNNNNCTGG | M.KpnNDMORF17825P |
| 17830 | R | Ksp4251ORF21690P (100% identity) | GAAYNNNNNNNCTGG | KpnNDMORF17825P |
| 17835 | 322 aa hypothetical protein | |||
| plasmid pKpvST147B_NDM-1 | ||||
| 29060 | ISL3-like element ISKpn25 family transposase | |||
| 29065 | R | Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | KpnNDMORF29075P |
| 29070 | S | S.Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | S.KpnNDMORF29075P |
| 29075 | M | M.Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | M.KpnNDMORF29075P |
| 29080 | 71 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4730 | drug/metabolite exporter YedA | |||
| 4735 | V | V.Ksp2N3ORFEP (75% identity) | V.KpnNDMORF4740P | |
| 4740 | M | M.KpnsBRORF3775P (100% identity) | CCWGG | M.KpnNDMORF4740P |
| 4745 | phosphohydrolase | |||
| 6330 | tellurite/colicin resistance protein | |||
| 6340 | M | M.Kox432ORF16015P (95% identity) | M.KpnNDMORF6340P | |
| 6345 | 110 aa hypothetical protein | |||
| 6380 | SOS-response repressor and protease LexA | |||
| ??? | M | M1.Rte1ORF7790P (65% identity) | M.KpnNDMORF6385P | |
| 6395 | 153 aa hypothetical protein | |||
| 12610 | ribulose-phosphate 3-epimerase | |||
| 12615 | M | M.KspC31DamP (100% identity) | GATC | M.KpnNDMDamP |
| 12620 | cell division protein DamX | |||
| 20970 | 72 aa hypothetical protein | |||
| 20975 | M | M1.Kpni392wORF2000P (100% identity) | M.KpnNDMORF20975P | |
| 20980 | DNA methyltransferase | |||
| 20975 | DNA cytosine methyltransferase | |||
| 20980 | M | M2.Kpni392wORF2000P (100% identity) | M.KpnNDMORF20980P | |
| 20985 | regulator | |||
| plasmid pKpvST147B_5 | ||||
| 29310 | 75 aa hypothetical protein | |||
| 29315 | M | M.Rpl13095ORF6118P (100% identity) | M.KpnNDMORF29315P | |
| 29320 | 277 aa hypothetical protein | |||
| plasmid pKpvST147B_NDM-1 | ||||
| 29135 | 0 aa hypothetical protein | |||
| 29140 | M | M.SmaBWH35ORF25885P (100% identity) | M.KpnNDMORF29140P | |
| 29145 | 73 aa hypothetical protein | |||
| plasmid pKpvST147B_virulence | ||||
| 27125 | 82 aa hypothetical protein | |||
| 27130 | R | Ksp6FORF29980P (100% identity) | KpnNDMORF27135P | |
| 27135 | M | M.Ksp6FORF29980P (100% identity) | M.KpnNDMORF27135P | |
| 27140 | 109 aa hypothetical protein | |||
| 28945 | 1126 aa hypothetical protein | |||
| 27025 | M | M.KquBL06ORF12610P (95% identity) | M.KpnNDMORF27025P | |
| 27030 | 81 aa hypothetical protein | |||