Burkholderia pseudomallei VB3253 |
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Putative Burkholderia pseudomallei VB3253 RM systems
Ref: Veeraraghavan,B. et al. unpublished
REBASE ref # 28816
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,017,865 bp | CP040531 |
| chromosome 2: | 3,162,636 bp | CP040532 |
REBASE acronym: Bps3253
Org_num: 34835
All begin FE789_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2215 | M48 family metallopeptidase | |||
| 2220 | R | BpsV25ORF4260P (100% identity) | CGGANNNNNNNTGG | Bps3253ORF2230P |
| 2225 | S | S.BpsP21885ORF8860P (100% identity) | CGGANNNNNNNTGG | S.Bps3253ORF2230P |
| 2230 | M | M.BpsP21885ORF8860P (100% identity) | CGGANNNNNNNTGG | M.Bps3253ORF2230P |
| 2235 | 80 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 6020 | ribbon-helix-helix protein, CopG family | |||
| 6025 | M | M.Bps46776ORF2670P (95% identity) | M.Bps3253ORF6025P | |
| 6030 | R | Bps46776ORF2670P (95% identity) | Bps3253ORF6025P | |
| 6035 | V | V.Bmu8756ORF15330P (84% identity) | V.Bps3253ORF6025P | |
| 6040 | GIY-YIG nuclease family protein | |||
| 6200 | helix-turn-helix domain-containing protein | |||
| 6205 | M | M.BpsR15ORF17835P (98% identity) | M.Bps3253ORF6205P | |
| 6210 | V | V.BpsBDDORF1696P (85% identity) | V.Bps3253ORF6205P | |
| 6215 | DEAD/DEAH box helicase | |||
| 6220 | restriction endonuclease | |||
| 6225 | RM | BpsR15ORFBP (99% identity) | Bps3253ORF6225P | |
| 6230 | DEAD/DEAH box helicase | |||
| 6290 | phage tail protein I | |||
| 6295 | M | M.Bps2514ORF14485P (52% identity) | M.Bps3253ORF6295P | |
| 6300 | 196 aa hypothetical protein | |||
| chromosome 2 | ||||
| 32715 | tryptophan synthase subunit alpha | |||
| 32720 | M | M.BspBGKORF4324P (100% identity) | GTWWAC | M.Bps3253ORF32720P |
| 32725 | tryptophan synthase subunit beta | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3875 | 100 aa hypothetical protein | |||
| 3880 | R | BpsE25ORF2253P (99% identity) | CACAG | Bps3253ORF3885P |
| 3885 | M | M.BpsBEKORF1589P (100% identity) | CACAG | M.Bps3253ORF3885P |
| 3890 | 115 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2200 | PAAR domain-containing protein | |||
| 2205 | R | BpsP21885McrCP (100% identity) | Bps3253McrCP | |
| 2210 | R | BpssB03McrBP (100% identity) | Bps3253McrBP | |
| 2215 | M48 family metallopeptidase | |||