Mycobacterium species Spyr1 |
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Putative Mycobacterium species Spyr1 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 14380
Complete sequence: 5,547,747 bp
GenBank #: CP002385 (NC_014814)
REBASE acronym: MspS1
Org_num: 6506
All begin Mspyr1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 25440 | 297 aa hypothetical protein | |||
| 25450 | R | Mfo6368ORF2700P (94% identity) | MspS1ORF25460P | |
| 25460 | M | M.Mka1166ORF21760P (92% identity) | M.MspS1ORF25460P | |
| 25470 | S | S.AspC21ORF1536P (29% identity) | S.MspS1ORF25460P | |
| 25480 | 171 aa hypothetical protein | |||
| 37720 | predicted metal-dependent hydrolase | |||
| 37730 | R | Sca66ORF20575P (81% identity) | MspS1ORF37750P | |
| 37740 | S | S.Mgo9456ORF3300P (41% identity) | S.MspS1ORF37750P | |
| 37750 | M | M.Psp9374ORF5935P (80% identity) | M.MspS1ORF37750P | |
| 37760 | 196 aa hypothetical protein | |||
| 52840 | Translation initiation factor IF-2, N-terminal | |||
| 52850 | R | MspTY81ORF48810P (96% identity) | MspS1ORF52870P | |
| 52860 | S | S.Ssp1755ORF12095P (69% identity) | S.MspS1ORF52870P | |
| 52870 | M | M.Mal12272ORF58380P (95% identity) | M.MspS1ORF52870P | |
| 52880 | type I restriction-modification system | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8680 | 644 aa hypothetical protein | |||
| 8690 | R | StrCORF574P (31% identity) | GCSGC | MspS1ORF8690P |
| 8700 | transposase, IS4 family | |||
| 8760 | transposase | |||
| ??? | M | M.MavHJWORF17280P (47% identity) | M.MspS1ORF8750P | |
| 8770 | helicase domain-containing protein | |||
| 8820 | 452 aa hypothetical protein | |||
| 8830 | RM | MspPH06ORF6670P (99% identity) | MspS1ORF8830P | |
| ??? | Eco57I restriction endonuclease | |||
| 8830 | 887 aa hypothetical protein | |||
| ??? | RM | M.MspPH06ORF6675BP (71% identity) | MspS1ORF8840P | |
| 8860 | 188 aa hypothetical protein | |||
| 37900 | 331 aa hypothetical protein | |||
| 37910 | M | M.AjeJS280ORF8160P (53% identity) | CCCGGG | M.MspS1ORF37910P |
| 37920 | 108 aa hypothetical protein | |||
| 46530 | 75 aa hypothetical protein Mspyr1_46380 | |||
| 46540 | R | Msp227ORF20620P (90% identity) | MspS1ORF46540P | |
| 46550 | transposase | |||
| 46550 | transposase | |||
| 46560 | V | DNA mismatch endonuclease vsr | V.MspS1ORF46570P | |
| 46570 | M | M.Mmo44395ORF4335P (93% identity) | M.MspS1ORF46570P | |
| 46580 | DNA/RNA helicase, superfamily II, SNF2 family | |||
| 48310 | transcriptional regulator, LysR family | |||
| 48330 | M | M.Mgi10742I (100% identity) | CTCGAG | M.MspS1ORF48330P |
| 48340 | R | MgiORF1344P (99% identity) | CTYRAG | MspS1ORF48330P |
| 48350 | 347 aa hypothetical protein | |||