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Putative Ruminococcus species JE7A12 RM systems
Ref: Embree,M. and Gaffney,J.R. unpublished
REBASE ref # 28998
Complete sequence: 2,440,231 bp
GenBank #: CP039381
REBASE acronym: Rsp7A12
Org_num: 35598
All begin E5Z56_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2350 | cell wall assembly/cell proliferation | |||
2355 | R | Pba22567ORF4885P (68% identity) | Rsp7A12ORF2360P | |
2360 | M | M.Dsp5638ORFCP (81% identity) | M.Rsp7A12ORF2360P | |
2365 | S | S2.ScoH2489ORFCP (37% identity) | S.Rsp7A12ORF2360P | |
2370 | 103 aa hypothetical protein | |||
5590 | 220 aa hypothetical protein | |||
5595 | M | M.Lru211ORF889P (34% identity) | M1.Rsp7A12ORF5595P | |
5600 | 171 aa hypothetical protein | |||
5605 | M | M.Amu500aORF8050P (79% identity) | M2.Rsp7A12ORF5595P | |
5610 | S | S.PmeBin100ORFDP (39% identity) | S.Rsp7A12ORF5595P | |
5615 | R | Gme92ORFBP (72% identity) | Rsp7A12ORF5595P | |
5620 | 95 aa hypothetical protein | |||
8790 | 347 aa hypothetical protein | |||
8795 | M | M.CspC1ORF6530P (86% identity) | M.Rsp7A12ORF8795P | |
8800 | S | S1.Cse1583ORF15615P (30% identity) | S1.Rsp7A12ORF8795P | |
8805 | S | S.CboST7BII (28% identity) | S2.Rsp7A12ORF8795P | |
8810 | integrase | |||
8815 | S | S3.Lin335ORF3095P (45% identity) | S3.Rsp7A12ORF8795P | |
8820 | 165 aa hypothetical protein | |||
8825 | R | PmeBin189ORFCP (80% identity) | Rsp7A12ORF8795P | |
8830 | DUF262 domain-containing protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1555 | NUDIX hydrolase | |||
1560 | RM | BREX-1 system adenine-specific | Rsp7A12ORF1560P | |
1565 | 283 aa hypothetical protein | |||
3670 | helix-turn-helix domain-containing protein | |||
3675 | M | M.PmeBin376ORFCP (77% identity) | M.Rsp7A12ORF3675P | |
3680 | TdeIII family type II restriction endonuclease | |||
5320 | 73 aa hypothetical protein | |||
5325 | M | M.Esis15702ORF8235P (65% identity) | M.Rsp7A12ORF5325P | |
5330 | 205 aa hypothetical protein | |||
5330 | 205 aa hypothetical protein | |||
5335 | R | M.Esi703ORF6770P (35% identity) | Rsp7A12ORF5335P | |
5340 | 167 aa hypothetical protein | |||
5345 | V | V.Esis15702ORF8225P (73% identity) | V.Rsp7A12ORF5335P | |
5350 | DUF1624 domain-containing protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
670 | 194 aa hypothetical protein | |||
675 | R | BprPMF1McrCP (64% identity) | Rsp7A12McrCP | |
680 | R | Ava988McrBP (30% identity) | Rsp7A12McrBP | |
685 | 23S rRNA (uracil(1939)-C(5))-methyltransferase | |||
5210 | 272 aa hypothetical protein | |||
5215 | R | Esi703ORF17830P (72% identity) | Rsp7A12ORF5215P | |
5220 | (deoxy)nucleoside triphosphate |