Bacteroides fragilis DCMOUH0085B |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Bacteroides fragilis DCMOUH0085B RM systems
Ref: Sydenham,T.V. et al. unpublished
REBASE ref # 28754
Complete sequence: 5,504,076 bp
GenBank #: CP037440
REBASE acronym: Bfr85B
Org_num: 34734
All begin IB64_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11670 | AAA family ATPase | |||
| ??? | C | C.BfrIHMA4ORF11325P (100% identity) | C.Bfr85BORF11685P | |
| 11680 | R | BfrIHMA4ORF11325P (100% identity) | Bfr85BORF11685P | |
| 11685 | M | M.BfrIHMA4ORF11325P (100% identity) | M.Bfr85BORF11685P | |
| 11690 | DNA-binding protein | |||
| 11695 | Fic family protein | |||
| 11700 | restriction endonuclease | |||
| 11705 | S | S2.BfrIHMA4ORF11325P (59% identity) | S.Bfr85BORF11685P | |
| 11710 | integrase | |||
| 16645 | 66 aa hypothetical protein | |||
| 16650 | C | C.Pjo12C29ORF2943P (100% identity) | C.Bfr85BORF16655P | |
| 16655 | M | M.Pjo12C29ORF2944P (100% identity) | M.Bfr85BORF16655P | |
| 16660 | R | BfrIHMA4ORF15805P (100% identity) | Bfr85BORF16655P | |
| 16665 | S1 RNA-binding domain-containing protein | |||
| 21665 | recombinase XerD | |||
| 21670 | S | S2.Bsa288ORF9480P (43% identity) | S2.Bfr85BORF21690P | |
| 21675 | DUF2971 domain-containing protein | |||
| 21680 | S | S4.Pdi574ORF8250P (55% identity) | S1.Bfr85BORF21690P | |
| 21685 | cell filamentation protein Fic | |||
| 21690 | M | M.BfrIHMA4ORF21005P (100% identity) | M.Bfr85BORF21690P | |
| 21695 | R | BfrIHMA4ORF21005P (100% identity) | Bfr85BORF21690P | |
| 21700 | XRE family transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1725 | IS256 family transposase | |||
| 1735 | RM | PmeBin96ORFBP (97% identity) | Bfr85BORF1735P | |
| 1740 | 55 aa hypothetical protein | |||
| 6485 | 584 aa hypothetical protein | |||
| 6490 | M | M.BfrIHMA4ORF6235P (100% identity) | M.Bfr85BORF6490P | |
| 6495 | clindamycin resistance transfer factor BtgB | |||
| 6615 | 207 aa hypothetical protein | |||
| 6620 | R | Pcl1C4ORF27660P (87% identity) | Bfr85BORF6625P | |
| 6625 | M | M.Pcl1C4ORF27660P (75% identity) | M.Bfr85BORF6625P | |
| 6630 | XRE family transcriptional regulator | |||
| 6765 | 117 aa hypothetical protein | |||
| 6770 | M | M.PmeBin13ORFDP (100% identity) | M.Bfr85BORF6770P | |
| 6775 | conjugative transposon protein TraN | |||
| 10255 | ATP-binding protein | |||
| 10260 | M | M.BfrIHMA4ORF9950P (100% identity) | M.Bfr85BORF10260P | |
| 10265 | R | BfrIHMA4ORF9950P (100% identity) | Bfr85BORF10260P | |
| 10270 | XRE family transcriptional regulator | |||
| 23610 | 139 aa hypothetical protein | |||
| 23615 | M | M.BfrYORF2470P (100% identity) | M.Bfr85BORF23615P | |
| 23620 | 116 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10015 | RluA family pseudouridine synthase | |||
| 10020 | R | BfrIHMA4ORF8885P (100% identity) | Bfr85BORF10025P | |
| 10025 | M | M.Bfr67BORF8710P (100% identity) | M.Bfr85BORF10025P | |
| 10030 | DUF5110 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16910 | chromosome partitioning protein ParA | |||
| 16915 | R | BfrIHMA4McrCP (100% identity) | Bfr85BMcrCP | |
| 16920 | R | BfrIHMA4McrBP (100% identity) | Bfr85BMcrBP | |
| 16925 | mobilization protein | |||