Bacteroides fragilis DCMOUH0042B |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Bacteroides fragilis DCMOUH0042B RM systems
Ref: Sydenham,T.V. et al. unpublished
REBASE ref # 28754
Complete sequence: 5,141,257 bp
GenBank #: CP036550
REBASE acronym: Bfr42B
Org_num: 34732
All begin HR50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3000 | IS1380-like element IS613 family transposase | |||
| 3005 | S | S.BthBFG55ORF1515P (51% identity) | S.Bfr42BORF3010P | |
| 3010 | M | M.BthBFG55ORF1515P (100% identity) | M.Bfr42BORF3010P | |
| 3015 | XRE family transcriptional regulator | |||
| 9395 | 359 aa hypothetical protein | |||
| 9400 | C | C.Pvu1098ORF10145P (100% identity) | C.Bfr42BORF9415P | |
| 9405 | R | PdiC09ORF553P (100% identity) | Bfr42BORF9415P | |
| 9410 | DUF4268 domain-containing protein | |||
| 9415 | M | M1.PdiC09ORF553P (100% identity) | M.Bfr42BORF9415P | |
| 9420 | cell filamentation protein Fic | |||
| 9425 | S | S1.Pvu1098ORF10145P (92% identity) | S1.Bfr42BORF9415P | |
| 9430 | S | S3.Pdi244ORF10590P (100% identity) | S2.Bfr42BORF9415P | |
| 9435 | S | S3.Pvu1098ORF10145P (100% identity) | S3.Bfr42BORF9415P | |
| 9440 | S | S1.Pdi244ORF10590P (54% identity) | S4.Bfr42BORF9415P | |
| 9445 | site-specific integrase | |||
| 9510 | GIY-YIG nuclease family protein | |||
| 9515 | M | M.PmeBin159ORFAP (95% identity) | M.Bfr42BORF9515P | |
| 9520 | Fic family protein | |||
| 9525 | S | S.PbrB14II (46% identity) | S.Bfr42BORF9515P | |
| 9530 | 444 aa hypothetical protein | |||
| 9535 | 229 aa hypothetical protein | |||
| 9540 | R | Pco1220ORF7675P (97% identity) | Bfr42BORF9515P | |
| 9545 | ATP-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9930 | restriction endonuclease | |||
| 9935 | RM | Bin919174ORF12590P (99% identity) | Bfr42BORF9935P | |
| 9940 | helicase | |||
| 13735 | helicase | |||
| ??? | RM | Bfr70ORF14315P (87% identity) | Bfr42BORF13740P | |
| 13745 | restriction endonuclease | |||
| 15995 | conjugative transposon protein TraN | |||
| 16000 | M | M.Bun8864ORF3602P (100% identity) | M.Bfr42BORF16000P | |
| 16005 | 117 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9340 | RluA family pseudouridine synthase | |||
| 9345 | R | BfrP207ORF975P (100% identity) | Bfr42BORF9350P | |
| 9350 | M | M.BfrGUT04ORFBP (99% identity) | M.Bfr42BORF9350P | |
| 9355 | DUF5110 domain-containing protein | |||