Escherichia coli 105 |
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Putative Escherichia coli 105 RM systems
Ref: Bono,J.L. and Arthur,T.M. unpublished
REBASE ref # 22851
| Sequence length: | GenBank #: | |
| Chromosome: | 5,459,492 bp | CP028700 |
| plasmid pTA105: | 92,738 bp | CP028701 |
REBASE acronym: Eco105B
Org_num: 34661
All begin C9E34_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25710 | DUF262 domain-containing protein | |||
| 25715 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco105BORF25720P |
| 25720 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco105BORF25720P |
| 25725 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco105BORF25720P |
| 25730 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2460 | protein DamX | |||
| 2465 | M | DNA adenine methylase | GATC | M.Eco105BDamP |
| 2470 | ribulose-phosphate 3-epimerase | |||
| 3010 | DUF2556 domain-containing protein | |||
| 3015 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco105BORF3015P |
| 3020 | Fis family transcriptional regulator | |||
| 9335 | recombination protein NinB | |||
| 9340 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco105BORF9340P |
| 9345 | NinE family protein | |||
| 10835 | phosphohydrolase | |||
| 10840 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco105BDcmP |
| 10845 | V | V.EcosPA8DcmP (100% identity) | V.Eco105BDcmP | |
| 10850 | drug/metabolite exporter YedA | |||
| 14880 | 329 aa hypothetical protein | |||
| 14885 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco105BORF14885P | |
| 14890 | 81 aa hypothetical protein | |||
| 15790 | 61 aa hypothetical protein | |||
| 15805 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco105BORF15805P | |
| 15810 | lipoprotein | |||
| 18950 | NinE family protein | |||
| 18955 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco105BORFAP |
| 18960 | recombination protein NinB | |||
| 25975 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco105BORF25975P |
| 25980 | ATP-dependent helicase | |||
| plasmid pTA105 | ||||
| 29380 | 59 aa hypothetical protein | |||
| 29385 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco105BORF29385P | |
| 29390 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25730 | endoribonuclease SymE | |||
| ??? | R | EcoX21GmrDP (100% identity) | Eco105BGmrDP | |
| 25740 | R | Ecos1613GmrSP (100% identity) | Eco105BGmrSP | |
| 25745 | DUF1127 domain-containing protein | |||