Escherichia coli 106 |
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Putative Escherichia coli 106 RM systems
Ref: Bono,J.L. and Arthur,T.M. unpublished
REBASE ref # 22851
| Sequence length: | GenBank #: | |
| Chromosome: | 5,438,592 bp | CP028698 |
| plasmid pTA106: | 92,729 bp | CP028699 |
REBASE acronym: Eco106B
Org_num: 34662
All begin C9E35_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25585 | DUF262 domain-containing protein | |||
| 25590 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco106BORF25595P |
| 25595 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco106BORF25595P |
| 25600 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco106BORF25595P |
| 25605 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2455 | protein DamX | |||
| 2460 | M | DNA adenine methylase | GATC | M.Eco106BDamP |
| 2465 | ribulose-phosphate 3-epimerase | |||
| 3020 | DUF2556 domain-containing protein | |||
| 3025 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco106BORF3025P |
| 3030 | Fis family transcriptional regulator | |||
| 9355 | recombination protein NinB | |||
| 9360 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco106BORF9360P |
| 9365 | NinE family protein | |||
| 10870 | phosphohydrolase | |||
| 10875 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco106BDcmP |
| 10880 | V | V.EcosPA8DcmP (100% identity) | V.Eco106BDcmP | |
| 10885 | drug/metabolite exporter YedA | |||
| 14765 | 329 aa hypothetical protein | |||
| 14770 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco106BORF14770P | |
| 14775 | 81 aa hypothetical protein | |||
| 15675 | 61 aa hypothetical protein | |||
| 15690 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco106BORF15690P | |
| 15695 | lipoprotein | |||
| 18820 | NinE family protein | |||
| 18825 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco106BORFAP |
| 18830 | recombination protein NinB | |||
| 25850 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco106BORF25850P |
| 25855 | ATP-dependent helicase | |||
| plasmid pTA106 | ||||
| 29250 | 59 aa hypothetical protein | |||
| 29255 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco106BORF29255P | |
| 29260 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25605 | endoribonuclease SymE | |||
| ??? | R | EcoX21GmrDP (100% identity) | Eco106BGmrDP | |
| 25615 | R | Ecos1613GmrSP (100% identity) | Eco106BGmrSP | |
| 25620 | DUF1127 domain-containing protein | |||