Escherichia coli 110 |
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Putative Escherichia coli 110 RM systems
Ref: Bono,J.L. and Arthur,T.M. unpublished
REBASE ref # 22851
| Sequence length: | GenBank #: | |
| Chromosome: | 5,442,850 bp | CP028687 |
| plasmid pTA110: | 92,718 bp | CP028689 |
REBASE acronym: Eco110B
Org_num: 34666
All begin C9E39_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25625 | DUF262 domain-containing protein | |||
| 25630 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco110BORF25635P |
| 25635 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco110BORF25635P |
| 25640 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco110BORF25635P |
| 25645 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2455 | protein DamX | |||
| 2460 | M | DNA adenine methylase | GATC | M.Eco110BDamP |
| 2465 | ribulose-phosphate 3-epimerase | |||
| 3005 | DUF2556 domain-containing protein | |||
| 3010 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco110BORF3010P |
| 3015 | Fis family transcriptional regulator | |||
| 9330 | recombination protein NinB | |||
| 9335 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco110BORF9335P |
| 9340 | NinE family protein | |||
| 10840 | phosphohydrolase | |||
| 10845 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco110BDcmP |
| 10850 | V | V.EcosPA8DcmP (100% identity) | V.Eco110BDcmP | |
| 10855 | drug/metabolite exporter YedA | |||
| 14135 | 81 aa hypothetical protein | |||
| 14140 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco110BORF14140P | |
| 14145 | 329 aa hypothetical protein | |||
| 15695 | 61 aa hypothetical protein | |||
| 15710 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco110BORF15710P | |
| 15715 | lipoprotein | |||
| 18850 | NinE family protein | |||
| 18855 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco110BORF18855P |
| 18860 | recombination protein NinB | |||
| 25890 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco110BORF25890P |
| 25895 | ATP-dependent helicase | |||
| plasmid pTA110 | ||||
| 29355 | 59 aa hypothetical protein | |||
| 29360 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco110BORF29360P | |
| 29365 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25645 | endoribonuclease SymE | |||
| ??? | R | EcoX21GmrDP (100% identity) | Eco110BGmrDP | |
| 25655 | R | Ecos1613GmrSP (100% identity) | Eco110BGmrSP | |
| 25660 | DUF1127 domain-containing protein | |||