Escherichia coli 112 |
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Putative Escherichia coli 112 RM systems
Ref: Bono,J.L. and Arthur,T.M. unpublished
REBASE ref # 22851
| Sequence length: | GenBank #: | |
| Chromosome: | 5,508,281 bp | CP028683 |
| plasmid pTA112: | 92,725 bp | CP028684 |
REBASE acronym: Eco112B
Org_num: 34668
All begin C9E41_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 26095 | DUF262 domain-containing protein | |||
| 26100 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco112BORF26105P |
| 26105 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco112BORF26105P |
| 26110 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco112BORF26105P |
| 26115 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2465 | protein DamX | |||
| 2470 | M | DNA adenine methylase | GATC | M.Eco112BDamP |
| 2475 | ribulose-phosphate 3-epimerase | |||
| 3015 | DUF2556 domain-containing protein | |||
| 3020 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco112BORF3020P |
| 3025 | Fis family transcriptional regulator | |||
| 9340 | recombination protein NinB | |||
| 9345 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco112BORF9345P |
| 9350 | NinE family protein | |||
| 10840 | phosphohydrolase | |||
| 10845 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco112BDcmP |
| 10850 | V | V.EcosPA8DcmP (100% identity) | V.Eco112BDcmP | |
| 10855 | drug/metabolite exporter YedA | |||
| 14890 | 329 aa hypothetical protein | |||
| 14895 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco112BORF14895P | |
| 14900 | 81 aa hypothetical protein | |||
| 15795 | 61 aa hypothetical protein | |||
| 15810 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco112BORF15810P | |
| 15815 | lipoprotein | |||
| 18895 | NinE family protein | |||
| 18900 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco112BORF18900P |
| 18905 | recombination protein NinB | |||
| 19335 | NinE family protein | |||
| 19340 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco112BORF19340P |
| 19345 | recombination protein NinB | |||
| 26360 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco112BORF26360P |
| 26365 | ATP-dependent helicase | |||
| plasmid pTA112 | ||||
| 29760 | 59 aa hypothetical protein | |||
| 29765 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco112BORF29765P | |
| 29770 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 26115 | endoribonuclease SymE | |||
| ??? | R | EcoX21GmrDP (100% identity) | Eco112BGmrDP | |
| 26125 | R | Ecos1613GmrSP (100% identity) | Eco112BGmrSP | |
| 26130 | DUF1127 domain-containing protein | |||