Escherichia coli 115 |
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Putative Escherichia coli 115 RM systems
Ref: Bono,J.L. and Arthur,T.M. unpublished
REBASE ref # 22851
| Sequence length: | GenBank #: | |
| Chromosome: | 5,396,497 bp | CP028674 |
| plasmid pTA115: | 93,174 bp | CP028676 |
REBASE acronym: Eco115B
Org_num: 34671
All begin C9E44_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25150 | DUF262 domain-containing protein | |||
| 25155 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco115BORF25160P |
| 25160 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco115BORF25160P |
| 25165 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco115BORF25160P |
| 25170 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2455 | protein DamX | |||
| 2460 | M | DNA adenine methylase | GATC | M.Eco115BDamP |
| 2465 | ribulose-phosphate 3-epimerase | |||
| 3005 | DUF2556 domain-containing protein | |||
| 3010 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco115BORF3010P |
| 3015 | Fis family transcriptional regulator | |||
| 10810 | phosphohydrolase | |||
| 10815 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco115BDcmP |
| 10820 | V | V.EcosPA8DcmP (100% identity) | V.Eco115BDcmP | |
| 10825 | drug/metabolite exporter YedA | |||
| 15370 | 61 aa hypothetical protein | |||
| 15385 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco115BORF15385P | |
| 15390 | lipoprotein | |||
| 23055 | LexA family transcriptional regulator | |||
| 23060 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco115BORF23060P |
| 23065 | PerC family transcriptional regulator | |||
| 25420 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco115BORF25420P |
| 25425 | ATP-dependent helicase | |||
| 25535 | 87 aa hypothetical protein | |||
| 25540 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.Eco115BORF25540P |
| 25545 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | Eco115BORF25540P |
| 25550 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco115BORF25540P |
| 25555 | DUF4102 domain-containing protein | |||
| plasmid pTA115 | ||||
| 28990 | 101 aa hypothetical protein | |||
| 28995 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco115BORF28995P | |
| 29000 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25170 | endoribonuclease SymE | |||
| ??? | R | EcoX21GmrDP (100% identity) | Eco115BGmrDP | |
| 25180 | R | Ecos1613GmrSP (100% identity) | Eco115BGmrSP | |
| 25185 | DUF1127 domain-containing protein | |||