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Putative Alicycliphilus denitrificans BC RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 12336
Sequence length: | GenBank #: | |
Chromosome: | 4,747,792 bp | ADWA00000000 |
Chromosome: | 4,637,013 bp | CP002449 (NC_014910) |
plasmid pALIDE01: | 119,718 bp | CP002450 (NC_014908) |
REBASE acronym: AdeBC
Org_num: 6534
All begin Alide_, AlideDRAFT_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1422 | 70 aa conserved hypothetical protein | |||
1423 | M | M.AdeBCORF1236P (100% identity) | M.AdeBCORF1423P | |
1424 | 94 aa conserved hypothetical protein | |||
1579 | 110 aa hypothetical protein | |||
1580 | M | M.AdeBCORF3590P (100% identity) | M.AdeBCORF1580P | |
1581 | 39 aa hypothetical protein | |||
1589 | Relaxase/mobilization nuclease family protein | |||
1590 | M | M.AdeBCORF3603P (100% identity) | TGATCA | M.AdeBCORF1590P |
1591 | R | AdeBCORF3603P (100% identity) | TGATCA | AdeBCORF1590P |
1592 | integrase family protein | |||
1943 | ATP/cobalamin adenosyltransferase | |||
1944 | M | M.AdeBCORF75P (100% identity) | M.AdeBCORF1944P | |
1945 | 73 aa conserved hypothetical protein | |||
4598 | M | M.SspSC18ORF18855P (50% identity) | CCNGG | M.AdeBCORF4598P |
Chromosome | ||||
74 | 73 aa hypothetical protein | |||
75 | M | M.AdeBCORF1944P (100% identity) | M.AdeBCORF75P | |
77 | ATP/cobalamin adenosyltransferase | |||
1235 | 94 aa hypothetical protein | |||
1236 | M | M.AdeBCORF1423P (100% identity) | M.AdeBCORF1236P | |
1237 | 70 aa hypothetical protein | |||
3589 | 110 aa hypothetical protein | |||
3590 | M | M.AdeBCORF1580P (100% identity) | M.AdeBCORF3590P | |
3591 | 39 aa hypothetical protein | |||
3602 | 120 aa hypothetical protein | |||
3603 | M | M.AdeBCORF1590P (100% identity) | TGATCA | M.AdeBCORF3603P |
3604 | R | AdeBCORF1590P (100% identity) | TGATCA | AdeBCORF3603P |
3605 | integrase family protein | |||
plasmid pALIDE01 | ||||
4549 | Integrase catalytic region protein | |||
4550 | M | M.SspSC18ORF18855P (50% identity) | CCNGG | M.AdeBCORF4550P |
4551 | Integrase catalytic region protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
4406 | 127 aa hypothetical protein | |||
4407 | R | AdeBCORF4626P (100% identity) | AdeBCORF4408P | |
4408 | M | M.AdeBCORF4626P (100% identity) | M.AdeBCORF4408P | |
4409 | transcriptional modulator of MazE/toxin, MazF | |||
plasmid pALIDE01 | ||||
4624 | 127 aa hypothetical protein | |||
4625 | R | AdeBCORF4408P (100% identity) | AdeBCORF4626P | |
4626 | M | M.AdeBCORF4408P (100% identity) | M.AdeBCORF4626P | |
4627 | PemK family protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
4410 | 73 aa conserved hypothetical protein | |||
4411 | R | AdeBCMrr4P (100% identity) | AdeBCMrr2P | |
4412 | histone family protein DNA-binding protein | |||
plasmid pALIDE01 | ||||
4628 | 73 aa hypothetical protein | |||
4629 | R | AdeBCMrr2P (100% identity) | AdeBCMrr4P | |
4630 | histone family protein DNA-binding protein |