Salmonella enterica subsp. enterica 17447945 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica 17447945 RM systems
Ref: Schonfeld,J. et al. unpublished
REBASE ref # 28592
| Sequence length: | GenBank #: | |
| Chromosome: | 4,817,004 bp | CP039854 |
| plasmid p11-0972.1: | 93,897 bp | CP039855 |
REBASE acronym: Sen7945
Org_num: 34554
All begin E5O08_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23105 | endoribonuclease SymE | |||
| 23110 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen7945ORF23115P |
| 23115 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen7945ORF23115P |
| 23120 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen7945ORF23115P |
| 23125 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10025 | drug/metabolite exporter YedA | |||
| 10030 | V | V.StyUK1DcmP (100% identity) | V.Sen7945DcmP | |
| 10035 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen7945DcmP |
| 10040 | phosphohydrolase | |||
| 13345 | DUF550 domain-containing protein | |||
| 13350 | M | M.Sens29958ORF6205P (100% identity) | M.Sen7945ORF13350P | |
| 13355 | ead/Ea22-like family protein | |||
| 13900 | RusA family crossover junction | |||
| 13905 | M | M.Sens29958ORF5665P (100% identity) | M.Sen7945ORF13905P | |
| 13910 | GntR family transcriptional regulator | |||
| 13980 | ATP-binding protein | |||
| 13985 | M | M.Sens29958ORF5585P (100% identity) | M.Sen7945ORF13985P | |
| 13990 | DUF4102 domain-containing protein | |||
| 17320 | DNA-binding transcriptional regulator Fis | |||
| 17325 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen7945ORF17325P |
| 17330 | DUF2556 domain-containing protein | |||
| 17815 | ribulose-phosphate 3-epimerase | |||
| 17820 | M | M.StyTDamP (100% identity) | GATC | M.Sen7945DamP |
| 17825 | cell division protein DamX | |||
| 22955 | ATP-binding protein | |||
| 22960 | RM | StyUK1IV (100% identity) | GATCAG | Sen7945ORF22960P |
| 22965 | BREX system P-loop protein BrxC | |||
| plasmid p11-0972.1 | ||||
| 23990 | 62 aa hypothetical protein | |||
| 23995 | M | M.StyUK1ORFAP (100% identity) | M.Sen7945ORF23995P | |
| 24000 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1800 | MFS transporter | |||
| 1805 | M | M.Sens29958ORF17880P (100% identity) | CAGAG | M.Sen7945ORF1805P |
| 1810 | R | StyUK1IP (99% identity) | CAGAG | Sen7945ORF1805P |
| 1815 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23120 | type I restriction-modification system | |||
| 23125 | R | StyUK1MrrP (100% identity) | Sen7945MrrP | |
| 23130 | BrnT family toxin | |||