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Putative Escherichia coli O104:H4 FWSEC0009 RM systems
Ref: Tyson,S. et al. unpublished
REBASE ref # 28572
Sequence length: | GenBank #: | |
Chromosome: | 5,277,234 bp | CP031902 |
plasmid unnamed18: | 88,545 bp | CP031903 |
REBASE acronym: Eco0009
Org_num: 34299
All begin C8200_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
23795 | DUF262 domain-containing protein | |||
23800 | R | SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | Eco0009ORF23805P |
23805 | M | M.SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | M.Eco0009ORF23805P |
23810 | S | S.SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | S.Eco0009ORF23805P |
23815 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2320 | cell division protein DamX | |||
2325 | M | DNA adenine methylase | GATC | M.Eco0009DamP |
2330 | ribulose-phosphate 3-epimerase | |||
2910 | DUF2556 domain-containing protein | |||
2915 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.Eco0009ORF2915P |
2920 | Fis family transcriptional regulator | |||
10730 | phosphohydrolase | |||
10735 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco0009DcmP |
10740 | V | V.SsoSE61DcmP (100% identity) | V.Eco0009DcmP | |
10745 | drug/metabolite exporter YedA | |||
11345 | PerC family transcriptional regulator | |||
11350 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco0009ORF11350P |
11355 | LexA family transcriptional regulator | |||
11390 | 67 aa hypothetical protein | |||
11395 | M | M.EcoOS402ORF3850P (100% identity) | A | M.Eco0009ORF11395P |
11415 | DUF1737 domain-containing protein | |||
15495 | 108 aa hypothetical protein | |||
15515 | M | M.SsoL4094ORF17545P (100% identity) | A | M.Eco0009ORF15515P |
15520 | TrmB family transcriptional regulator | |||
17660 | LexA family transcriptional regulator | |||
17665 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco0009ORF17665P |
17670 | R | Sso1099IP (100% identity) | CTGCAG | Eco0009ORF17665P |
17675 | 261 aa hypothetical protein | |||
17760 | regulator | |||
17765 | M | M.Esp10290ORF1290P (100% identity) | GATC | M.Eco0009ORF17765P |
17770 | DUF1382 family protein | |||
plasmid unnamed18 | ||||
28170 | 0 aa hypothetical protein | |||
28175 | M | M.Sso3794ORF26595P (100% identity) | SAY | M.Eco0009ORF28175P |
28180 | 73 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5015 | 97 aa hypothetical protein | |||
5020 | R | Kpn0718ORF815P (100% identity) | ACCACC | Eco0009ORF5025P |
5025 | M | M.Kpn0718ORF815P (100% identity) | ACCACC | M.Eco0009ORF5025P |
5030 | serine protease |