Escherichia coli ZJ3920 |
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Putative Escherichia coli ZJ3920 RM systems
Ref: Shen,Z. et al. unpublished
REBASE ref # 28574
| Sequence length: | GenBank #: | |
| Chromosome: | 5,020,272 bp | CP020545 |
| plasmid pZJ3920-2: | 127,809 bp | CP020547 |
REBASE acronym: Eco3920
Org_num: 34314
All begin B6V57_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17300 | 60 aa hypothetical protein | |||
| 17305 | R | EcoW004ORF12170P (100% identity) | Eco3920ORF17320P | |
| 17310 | S | S.Mmo48659ORF2735P (100% identity) | S.Eco3920ORF17320P | |
| 17315 | anticodon nuclease | |||
| 17320 | M | M.Mmo48659ORF2735P (100% identity) | M.Eco3920ORF17320P | |
| 17325 | 0 aa hypothetical protein | |||
| 25660 | 113 aa hypothetical protein | |||
| 25665 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco3920ORF25670P |
| 25670 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco3920ORF25670P |
| 25675 | R | EcosS1ORF16790P (100% identity) | AACNNNNNNGTGC | Eco3920ORF25670P |
| 25680 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6805 | TrmB family transcriptional regulator | |||
| 6810 | M | M.SboBSORF1444P (100% identity) | A | M.Eco3920ORF6810P |
| 6830 | 73 aa hypothetical protein | |||
| 10365 | drug/metabolite exporter YedA | |||
| 10370 | V | V.SflC32DcmP (74% identity) | V.Eco3920DcmP | |
| 10375 | M | M.EcoXMDcmP (100% identity) | CCWGG | M.Eco3920DcmP |
| 10380 | phosphohydrolase | |||
| 18400 | Fis family transcriptional regulator | |||
| 18405 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco3920ORF18405P |
| 18410 | transporter | |||
| 19035 | ribulose-phosphate 3-epimerase | |||
| 19040 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco3920DamP |
| 19045 | cell division protein DamX | |||
| plasmid pZJ3920-2 | ||||
| 26955 | 189 aa hypothetical protein | |||
| 26960 | R | Ubap201ORF4P (100% identity) | CCWGG | Eco3920ORF26965P |
| 26965 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.Eco3920ORF26965P |
| 26970 | 88 aa hypothetical protein | |||
| 27555 | 73 aa hypothetical protein | |||
| 27560 | M | M.SspPIBORF23080P (100% identity) | M.Eco3920ORF27560P | |
| 27565 | 0 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14185 | damage-inducible protein DinI | |||
| 14190 | R | EspFAAGmrSDP (100% identity) | Eco3920GmrSDP | |
| 14195 | resolvase | |||
| 25650 | R | SenHNK130McrCP (100% identity) | Eco3920McrCP | |
| 25655 | R | Eco18006McrBP (100% identity) | Eco3920McrBP | |
| 25660 | 113 aa hypothetical protein | |||
| 25675 | type I restriction-modification system | |||
| 25680 | R | EcosS1MrrP (100% identity) | Eco3920MrrP | |
| 25685 | GTPase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5835 | protein ninB | |||
| 5840 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco3920ORF5840P |
| 5845 | NinE family protein | |||