Salmonella enterica subsp. enterica ID135534 |
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Putative Salmonella enterica subsp. enterica ID135534 RM systems
Ref: Schonfeld,J. et al. unpublished
REBASE ref # 28593
Complete sequence: 4,999,790 bp
GenBank #: CP039607
REBASE acronym: Sen5534
Org_num: 34362
All begin E5O13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24465 | endoribonuclease SymE | |||
| 24470 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen5534ORF24475P |
| 24475 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen5534ORF24475P |
| 24480 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen5534ORF24475P |
| 24485 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10220 | drug/metabolite exporter YedA | |||
| 10225 | V | V.StyUK1DcmP (100% identity) | V.Sen5534DcmP | |
| 10230 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen5534DcmP |
| 10235 | phosphohydrolase | |||
| 10495 | RusA family crossover junction | |||
| 10500 | M | M.Ssp17155ORFIP (100% identity) | M.Sen5534ORF10500P | |
| 10505 | PerC family transcriptional regulator | |||
| 13865 | 0 aa hypothetical protein | |||
| 13870 | M | M.StyTORF1914P (100% identity) | M.Sen5534ORF13870P | |
| 13875 | ead/Ea22-like family protein | |||
| 14540 | thermonuclease family protein | |||
| 14545 | M | M.StyCORF187P (49% identity) | M.Sen5534ORF14545P | |
| 14550 | AraC family transcriptional regulator | |||
| 16985 | replication endonuclease | |||
| 16990 | M | M.SensSZL38ORF19965P (100% identity) | M.Sen5534ORF16990P | |
| 16995 | DUF2732 family protein | |||
| 17910 | DNA-binding transcriptional regulator Fis | |||
| 17915 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen5534ORF17915P |
| 17920 | DUF2556 domain-containing protein | |||
| 18405 | ribulose-phosphate 3-epimerase | |||
| 18410 | M | M.StyTDamP (100% identity) | GATC | M.Sen5534DamP |
| 18415 | cell division protein DamX | |||
| 22370 | PerC family transcriptional regulator | |||
| 22375 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen5534ORF22375P |
| 22380 | LexA family transcriptional regulator | |||
| 24315 | ATP-binding protein | |||
| 24320 | RM | StyUK1IV (100% identity) | GATCAG | Sen5534ORF24320P |
| 24325 | BREX system P-loop protein BrxC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1950 | MFS transporter | |||
| 1955 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen5534ORF1955P |
| 1960 | R | StyUK1IP (99% identity) | CAGAG | Sen5534ORF1955P |
| 1965 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24480 | type I restriction-modification system | |||
| 24485 | R | StyUK1MrrP (100% identity) | Sen5534MrrP | |
| 24490 | BrnT family toxin | |||