Aeromonas schubertii LF1708 |
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Putative Aeromonas schubertii LF1708 RM systems
Ref: Liu,C. et al. J. Fish Dis. 41 (10), 1529-1538 (2018)
REBASE ref # 28532
Complete sequence: 4,350,713 bp
GenBank #: CP039611
REBASE acronym: Asc1708
Org_num: 34119
All begin E2P79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 100 | beta-lactam response regulator transcription | |||
| 105 | R | VchSa5YORF2649P (99% identity) | Asc1708ORF120P | |
| 110 | anticodon nuclease | |||
| 115 | S | S.Vch10432ORF3652P (99% identity) | S.Asc1708ORF120P | |
| 120 | M | M.VchSa5YORF2649P (99% identity) | M.Asc1708ORF120P | |
| 125 | helix-turn-helix transcriptional regulator | |||
| 6725 | ATP-binding protein | |||
| 6730 | R | Ahy8N2ORFBP (99% identity) | Asc1708ORF6740P | |
| 6735 | S | S.AcaSVJ23ORF12770P (61% identity) | S.Asc1708ORF6740P | |
| 6740 | M | M.Asp2167ORFAP (99% identity) | M.Asc1708ORF6740P | |
| 6745 | 131 aa hypothetical protein | |||
| 12035 | 185 aa hypothetical protein | |||
| 12040 | S | S.PaesD5ORF11295P (72% identity) | S.Asc1708ORF12045P | |
| 12045 | M | M.Psh725ORF12755P (89% identity) | M.Asc1708ORF12045P | |
| 12050 | R | Psh725ORF12755P (99% identity) | Asc1708ORF12045P | |
| 12055 | helix-turn-helix transcriptional regulator | |||
| 14045 | restriction endonuclease | |||
| 14050 | R | Asc43700ORF2590P (97% identity) | Asc1708ORF14060P | |
| 14055 | Fic family protein | |||
| 14060 | M | M.Asc43700ORF2590P (96% identity) | M.Asc1708ORF14060P | |
| 14065 | S | S.AhyWCX23ORF2120P (42% identity) | S.Asc1708ORF14060P | |
| 14070 | ATP-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2805 | cell division protein DamX | |||
| 2810 | M | M.Asc43700DamP (99% identity) | M.Asc1708DamP | |
| 2815 | ribulose-phosphate 3-epimerase | |||
| 20815 | 8-oxoguanine DNA glycosylase | |||
| 20820 | M | M.Ave32286ORFAP (100% identity) | M.Asc1708ORF20820P | |
| 20825 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14040 | pseudogene | |||
| 14045 | R | Asc1483MrrP (95% identity) | Asc1708MrrP | |
| 14050 | type I restriction-modification system | |||