Desulfobacteraceae bacterium Eth-SRB1 |
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Putative Desulfobacteraceae bacterium Eth-SRB1 RM systems
Ref: Chen,S.-C. et al. Nature (2019)
REBASE ref # 28513
GenBank #: RPGP00000000
REBASE acronym: DbaSRB1
Org_num: 34087
All begin SRB1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1439 | 104 aa hypothetical protein | |||
| 1440 | M | M.DspBuS5ORF585P (82% identity) | M.DbaSRB1ORF1440P | |
| 1441 | 358 aa hypothetical protein | |||
| 1442 | 43 aa hypothetical protein | |||
| 1443 | 82 aa hypothetical protein | |||
| 1444 | S | S.Msp14BORFCP (47% identity) | S.DbaSRB1ORF1440P | |
| 1445 | ATP-dependent endonuclease of the OLD | |||
| 1446 | DNA helicase II / ATP-dependent DNA helicase | |||
| 1447 | 42 aa hypothetical protein | |||
| 1448 | 342 aa hypothetical protein | |||
| 1449 | R | PspSCADCORF205255P (78% identity) | DbaSRB1ORF1440P | |
| 1450 | 136 aa hypothetical protein | |||
| 2176 | 87 aa hypothetical protein | |||
| 2177 | R | DspBuS5ORF2510P (88% identity) | DbaSRB1ORF2181P | |
| 2178 | S | S.Nsp9414ORF29130P (37% identity) | S.DbaSRB1ORF2181P | |
| 2179 | 82 aa hypothetical protein | |||
| 2180 | 344 aa hypothetical protein | |||
| ??? | M | M.DspBuS5ORF2510P (71% identity) | M.DbaSRB1ORF2181P | |
| 2183 | lipopolysaccharide export system permease | |||
| 592 | 332 aa hypothetical protein | |||
| 593 | S | S.AflORF16945P (47% identity) | S2.DbaSRB1ORF595P | |
| 594 | 366 aa hypothetical protein | |||
| 595 | M | M.RspOXR11ORF18500P (67% identity) | M.DbaSRB1ORF595P | |
| 596 | R | AcoA42IP (59% identity) | DbaSRB1ORF595P | |
| 597 | 284 aa hypothetical protein | |||
| 756 | 190 aa hypothetical protein | |||
| 757 | R | 85 aa hypothetical protein | DbaSRB1ORF759P | |
| 758 | S | S.MkoLM6ORF4387P (58% identity) | S.DbaSRB1ORF759P | |
| 759 | M | type I restriction enzyme M protein | M.DbaSRB1ORF759P | |
| 760 | monovalent cation:H+ antiporter-2, CPA2 family | |||
| 829 | 267 aa hypothetical protein | |||
| 830 | S | S2.Bsp10303ORFAP (43% identity) | S.DbaSRB1ORF830P | |
| 831 | 155 aa hypothetical protein | |||
| 893 | 133 aa hypothetical protein | |||
| 894 | R | CspAM553ORF11125P (60% identity) | DbaSRB1ORF895P | |
| 895 | M | M.TsyCad16ORFMP (42% identity) | M.DbaSRB1ORF895P | |
| 896 | 407 aa hypothetical protein | |||
| 940 | 1018 aa hypothetical protein | |||
| 941 | M | M.PspNL19ORF23900P (78% identity) | M.DbaSRB1ORF941P | |
| 942 | S | S.Csp295ORF5005P (33% identity) | S1.DbaSRB1ORF941P | |
| 943 | 511 aa hypothetical protein | |||
| 944 | 269 aa hypothetical protein | |||
| 945 | S | 71 aa hypothetical protein | S2.DbaSRB1ORF941P | |
| 946 | S | S1.QauD9ORF5750P (62% identity) | S3.DbaSRB1ORF941P | |
| 947 | R | PspIBORF6372P (72% identity) | DbaSRB1ORF941P | |
| 948 | uncharacterized protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1147 | RM | Mha6AcORF1682P (33% identity) | DbaSRB1ORF1147P | |
| 1148 | DNA excision repair protein ERCC-2 | |||
| 1390 | 220 aa hypothetical protein | |||
| 1391 | R | Dli5ac10ORF49580P (70% identity) | DbaSRB1ORF1392P | |
| 1392 | M | M.SspADCORF10265P (48% identity) | M.DbaSRB1ORF1392P | |
| 1393 | 120 aa hypothetical protein | |||
| 1545 | phosphoribosylglycinamide formyltransferase 1 | |||
| 1546 | RM | MboBA1ORF651P (62% identity) | DbaSRB1ORF1546P | |
| 1547 | 118 aa hypothetical protein | |||
| 2237 | 157 aa hypothetical protein | |||
| 2238 | M | M.AbaOC070ORFHP (50% identity) | M.DbaSRB1ORF2238P | |
| 2239 | R | AfeV8ORF5215P (75% identity) | DbaSRB1ORF2238P | |
| 2240 | 346 aa hypothetical protein | |||
| 382 | 130 aa hypothetical protein | |||
| 383 | R | MspR50ORF4750P (64% identity) | DbaSRB1ORF384P | |
| 384 | M | M.Hfl51ORFDP (67% identity) | M.DbaSRB1ORF384P | |
| 385 | multiple antibiotic resistance protein | |||
| 393 | 184 aa hypothetical protein | |||
| 394 | R | Aba57ORF12515P (60% identity) | DbaSRB1ORF395P | |
| 395 | M | M.Aba57ORF12515P (74% identity) | M.DbaSRB1ORF395P | |
| 396 | 80 aa hypothetical protein | |||
| 2329 | adenine-specific DNA-methyltransferase | |||
| 2330 | V | V.ObaTAV1ORF2988P (43% identity) | V.DbaSRB1ORF2332P | |
| 2331 | R | Dbazrk40ORF9600P (51% identity) | DbaSRB1ORF2332P | |
| 2332 | M | M.BspNSP21ORFDP (60% identity) | M.DbaSRB1ORF2332P | |
| 2333 | 98 aa hypothetical protein | |||
| 473 | 225 aa hypothetical protein | |||
| 474 | RM | DbaSRB2ORF1495P (69% identity) | DbaSRB1ORF474P | |
| 475 | adenine-specific DNA-methyltransferase | |||
| 822 | 153 aa hypothetical protein | |||
| 823 | M | M.Vba44730ORF4515P (35% identity) | M.DbaSRB1ORF823P | |
| 824 | 110 aa hypothetical protein | |||
| 825 | restriction endonuclease | |||
| 826 | R | Vba44730ORF4515P (30% identity) | DbaSRB1ORF823P | |
| 827 | V | V.PbaCA11ORF53050P (64% identity) | V.DbaSRB1ORF823P | |
| 828 | 126 aa hypothetical protein | |||
| 2796 | 154 aa hypothetical protein | |||
| 2797 | R | Lsp902ORF22230P (60% identity) | DbaSRB1ORF2798P | |
| 2798 | M | M.PprC007ORFFP (54% identity) | M.DbaSRB1ORF2798P | |
| 2799 | 195 aa hypothetical protein | |||
| 2816 | 275 aa hypothetical protein | |||
| 2817 | M | M.AspCfxKORF595P (40% identity) | M.DbaSRB1ORF2817P | |
| 2818 | uncharacterized protein | |||
| 931 | dTDP-glucose 4,6-dehydratase | |||
| 932 | M | M.Gsp8ORF19210P (65% identity) | M.DbaSRB1ORF932P | |
| 933 | 55 aa hypothetical protein | |||
| 2960 | 143 aa hypothetical protein | |||
| 2961 | R | DspN47ORF44340P (77% identity) | DbaSRB1ORF2962P | |
| 2962 | M | M.Mme286ORFRP (83% identity) | M.DbaSRB1ORF2962P | |
| 2963 | 85 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 273 | 86 aa hypothetical protein | |||
| 274 | R | KstMBR1ORF3727P (73% identity) | DbaSRB1ORF275P | |
| 275 | M | M.Gth11263ORF4825P (70% identity) | M.DbaSRB1ORF275P | |
| 276 | 212 aa hypothetical protein | |||
| 300 | 349 aa hypothetical protein | |||
| 301 | M | M.TdeDORF1491P (57% identity) | M.DbaSRB1ORF301P | |
| 302 | 300 aa hypothetical protein | |||
| 303 | 56 aa hypothetical protein | |||
| 304 | 218 aa hypothetical protein | |||
| 305 | R | DspBuS5ORF1383P (86% identity) | DbaSRB1ORF301P | |
| 306 | 120 aa hypothetical protein | |||
| 2328 | 54 aa hypothetical protein | |||
| 2329 | M | M.DbaSRB2ORF3498P (72% identity) | M.DbaSRB1ORF2329P | |
| 2330 | DNA mismatch endonuclease, patch repair protein | |||
| 471 | 611 aa hypothetical protein | |||
| 472 | R | SspD17ORF4920P (68% identity) | DbaSRB1ORF475P | |
| 473 | 225 aa hypothetical protein | |||
| 474 | 1033 aa hypothetical protein | |||
| 475 | M | M.RspB4ORF17485P (59% identity) | M.DbaSRB1ORF475P | |
| 476 | 107 aa hypothetical protein | |||
| 2377 | 177 aa hypothetical protein | |||
| 2378 | M | M.DbaSRB1ORF301P (31% identity) | M.DbaSRB1ORF2378P | |
| 2379 | 157 aa hypothetical protein | |||
| 2383 | 845 aa hypothetical protein | |||
| 2384 | M | M.Mst26271ORF1210P (52% identity) | M.DbaSRB1ORF2384P | |
| 2385 | DNA repair protein RadC | |||
| 885 | 107 aa hypothetical protein | |||
| 886 | M | M.DbaSRB2ORF1602P (84% identity) | M.DbaSRB1ORF886P | |
| 887 | ATP-dependent DNA helicase RecG | |||
| 888 | R | DspBuS5ORF451P (95% identity) | DbaSRB1ORF886P | |
| 889 | glucosamine---fructose-6-phosphate | |||