Desulfobacteraceae bacterium Eth-SRB2 |
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Putative Desulfobacteraceae bacterium Eth-SRB2 RM systems
Ref: Chen,S.-C. et al. Nature (2019)
REBASE ref # 28513
GenBank #: RPGQ00000000
REBASE acronym: DbaSRB2
Org_num: 34088
All begin SRB2_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4217 | M | M.MarArch1ORF1588P (43% identity) | M.DbaSRB2ORF4217P | |
| 4218 | hypothetical protein | |||
| 3055 | 192 aa hypothetical protein | |||
| 3056 | M | M.VbaS94ORF13050P (71% identity) | M.DbaSRB2ORF3056P | |
| 3057 | S | S1.BspG3I (32% identity) | S.DbaSRB2ORF3056P | |
| 3058 | ATP-dependent DNA helicase RecG | |||
| 3059 | R | SspJC202ORF8090P (74% identity) | DbaSRB2ORF3056P | |
| 3060 | uncharacterized protein | |||
| 2478 | 94 aa hypothetical protein | |||
| ??? | R | MboBA1ORF1196P (80% identity) | DbaSRB2ORF2485P | |
| 2481 | S | 81 aa hypothetical protein | S1.DbaSRB2ORF2485P | |
| 2482 | type I restriction enzyme, S subunit | |||
| 2483 | 37 aa hypothetical protein | |||
| 2484 | S | S.DafWBORFBP (78% identity) | S2.DbaSRB2ORF2485P | |
| 2485 | M | M.MboBA1ORF1196P (82% identity) | M.DbaSRB2ORF2485P | |
| 2486 | hypothetical protein | |||
| 1705 | 500 aa hypothetical protein | |||
| 1706 | R | Dph13687ORF2540P (77% identity) | DbaSRB2ORF1707P | |
| 1707 | M | M.Dph13687ORF2540P (83% identity) | M.DbaSRB2ORF1707P | |
| 1708 | S | S.Vch14107ORFDP (44% identity) | S.DbaSRB2ORF1707P | |
| 1709 | 552 aa hypothetical protein | |||
| 3435 | ribonuclease HII | |||
| 3436 | M | M.MstAC3ORF120756P (83% identity) | M.DbaSRB2ORF3436P | |
| 3437 | S | S2.GspWH15ORF4810P (57% identity) | S1.DbaSRB2ORF3436P | |
| 3438 | S | S.NspENR4ORF2850P (39% identity) | S2.DbaSRB2ORF3436P | |
| 3439 | 222 aa hypothetical protein | |||
| 3440 | R | MstAC3ORF120756P (78% identity) | DbaSRB2ORF3436P | |
| 3441 | 145 aa hypothetical protein | |||
| 4873 | DNA repair protein RadC | |||
| 4874 | M | M.Dmu2059ORF3514P (72% identity) | M.DbaSRB2ORF4874P | |
| 4875 | S | S.Rba2083ORFBP (37% identity) | S.DbaSRB2ORF4874P | |
| 4876 | 102 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3881 | 216 aa hypothetical protein | |||
| 3882 | RM | DbaSRB2ORF1377P (74% identity) | DbaSRB2ORF3882P | |
| 1488 | 232 aa hypothetical protein | |||
| 1489 | M | M.DspBuS5ORF3961P (80% identity) | M.DbaSRB2ORF1489P | |
| 1490 | 216 aa hypothetical protein | |||
| 1494 | 224 aa hypothetical protein | |||
| 1495 | RM | DbaSRB1ORF474P (69% identity) | DbaSRB2ORF1495P | |
| 1496 | 80 aa hypothetical protein | |||
| 58 | 1173 aa hypothetical protein | |||
| ??? | RM | DspTolSRORF5460P (63% identity) | DbaSRB2ORF59P | |
| 61 | 417 aa hypothetical protein | |||
| 2049 | 419 aa hypothetical protein | |||
| 2050 | RM | DspTolSRORF5910P (52% identity) | DbaSRB2ORF2050P | |
| 2051 | 285 aa hypothetical protein | |||
| 3248 | 70 aa hypothetical protein | |||
| 3249 | M | M.Dma2077ORF8170P (59% identity) | M.DbaSRB2ORF3249P | |
| 1850 | repressor LexA | |||
| 1851 | RM | Pmu1806ORFAP (25% identity) | DbaSRB2ORF1851P | |
| 1852 | 210 aa hypothetical protein | |||
| 1376 | 216 aa hypothetical protein | |||
| 1377 | RM | DbaSRB2ORF3882P (74% identity) | DbaSRB2ORF1377P | |
| 1378 | 232 aa hypothetical protein | |||
| 1872 | 56 aa hypothetical protein | |||
| 1873 | RM | DspN47ORF28420P (68% identity) | DbaSRB2ORF1873P | |
| 1874 | 223 aa hypothetical protein | |||
| 837 | 365 aa hypothetical protein | |||
| 838 | R | SbrRU1ORF784P (71% identity) | DbaSRB2ORF839P | |
| 839 | M | M.SbrRU1ORF784P (73% identity) | M.DbaSRB2ORF839P | |
| 840 | 1332 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3102 | 73 aa hypothetical protein | |||
| ??? | R | Fpa1ORF16070P (83% identity) | DbaSRB2ORF3107P | |
| 3105 | 49 aa hypothetical protein | |||
| 3106 | 256 aa hypothetical protein | |||
| ??? | M | M.BbaG10ORF7670P (72% identity) | M.DbaSRB2ORF3107P | |
| 3110 | 142 aa hypothetical protein | |||
| 1599 | 73 aa hypothetical protein | |||
| 1600 | R | DbaSRB1ORF886P (82% identity) | DbaSRB2ORF1602P | |
| 1601 | ATP-dependent DNA helicase RecG | |||
| 1602 | M | M.DbaSRB1ORF886P (84% identity) | M.DbaSRB2ORF1602P | |
| 1603 | 317 aa hypothetical protein | |||
| 3497 | DNA helicase II / ATP-dependent DNA helicase | |||
| 3498 | M | M.DbaSRB1ORF2329P (72% identity) | M.DbaSRB2ORF3498P | |
| 3499 | 115 aa hypothetical protein | |||
| 3500 | 135 aa hypothetical protein | |||
| 3501 | R | SspADCORF16190P (54% identity) | DbaSRB2ORF3498P | |
| 3502 | 72 aa hypothetical protein | |||