Salmonella enterica subsp. enterica ID100303 |
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Putative Salmonella enterica subsp. enterica ID100303 RM systems
Ref: Schonfeld,J. et al. unpublished
REBASE ref # 28592
Complete sequence: 4,929,627 bp
GenBank #: CP039569
REBASE acronym: Sen0303
Org_num: 34358
All begin E5N93_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23985 | endoribonuclease SymE | |||
| 23990 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen0303ORF23995P |
| 23995 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen0303ORF23995P |
| 24000 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen0303ORF23995P |
| 24005 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10550 | drug/metabolite exporter YedA | |||
| 10555 | V | very short patch repair endonuclease | V.Sen0303DcmP | |
| 10560 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen0303DcmP |
| 10565 | phosphohydrolase | |||
| 10825 | RusA family crossover junction | |||
| 10830 | M | M.Ssp17155ORFIP (100% identity) | M.Sen0303ORF10830P | |
| 10835 | PerC family transcriptional regulator | |||
| 14600 | thermonuclease family protein | |||
| 14605 | M | M.StyCORF187P (49% identity) | M.Sen0303ORF14605P | |
| 14610 | AraC family transcriptional regulator | |||
| 18195 | DNA-binding transcriptional regulator Fis | |||
| 18200 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen0303ORF18200P |
| 18205 | DUF2556 domain-containing protein | |||
| 18690 | ribulose-phosphate 3-epimerase | |||
| 18695 | M | adenine-specific DNA-methyltransferase | GATC | M.Sen0303DamP |
| 18700 | cell division protein DamX | |||
| 23835 | ATP-binding protein | |||
| 23840 | RM | StyUK1IV (100% identity) | GATCAG | Sen0303ORF23840P |
| 23845 | BREX system P-loop protein BrxC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2275 | MFS transporter | |||
| 2280 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen0303ORF2280P |
| 2285 | R | StyUK1IP (99% identity) | CAGAG | Sen0303ORF2280P |
| 2290 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24000 | type I restriction-modification system | |||
| 24005 | R | StyUK1MrrP (100% identity) | Sen0303MrrP | |
| 24010 | BrnT family toxin | |||