Salmonella enterica subsp. enterica 08-193-2358 |
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Putative Salmonella enterica subsp. enterica 08-193-2358 RM systems
Ref: Schonfeld,J. et al. unpublished
REBASE ref # 28592
Complete sequence: 4,996,602 bp
GenBank #: CP039564
REBASE acronym: Sen2358
Org_num: 34338
All begin E5N89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24440 | endoribonuclease SymE | |||
| 24445 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen2358ORF24450P |
| 24450 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen2358ORF24450P |
| 24455 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen2358ORF24450P |
| 24460 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10215 | drug/metabolite exporter YedA | |||
| 10220 | V | V.StyUK1DcmP (100% identity) | V.Sen2358DcmP | |
| 10225 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen2358DcmP |
| 10230 | phosphohydrolase | |||
| 10490 | RusA family crossover junction | |||
| 10495 | M | M.Ssp17155ORFIP (100% identity) | M.Sen2358ORF10495P | |
| 10500 | PerC family transcriptional regulator | |||
| 13850 | 0 aa hypothetical protein | |||
| 13855 | M | M.StyTORF1914P (100% identity) | M.Sen2358ORF13855P | |
| 13860 | ead/Ea22-like family protein | |||
| 14525 | thermonuclease family protein | |||
| 14530 | M | M.StyCORF187P (49% identity) | M.Sen2358ORF14530P | |
| 14535 | AraC family transcriptional regulator | |||
| 16965 | replication endonuclease | |||
| 16970 | M | M.SensSZL38ORF19965P (100% identity) | M.Sen2358ORF16970P | |
| 16975 | DUF2732 family protein | |||
| 17890 | DNA-binding transcriptional regulator Fis | |||
| 17895 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen2358ORF17895P |
| 17900 | DUF2556 domain-containing protein | |||
| 18385 | ribulose-phosphate 3-epimerase | |||
| 18390 | M | adenine-specific DNA-methyltransferase | GATC | M.Sen2358DamP |
| 18395 | cell division protein DamX | |||
| 22345 | PerC family transcriptional regulator | |||
| 22350 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen2358ORF22350P |
| 22355 | LexA family transcriptional regulator | |||
| 24290 | ATP-binding protein | |||
| 24295 | RM | StyUK1IV (100% identity) | GATCAG | Sen2358ORF24295P |
| 24300 | BREX system P-loop protein BrxC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1950 | MFS transporter | |||
| 1955 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen2358ORF1955P |
| 1960 | R | StyUK1IP (99% identity) | CAGAG | Sen2358ORF1955P |
| 1965 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24455 | type I restriction-modification system | |||
| 24460 | R | StyUK1MrrP (100% identity) | Sen2358MrrP | |
| 24465 | BrnT family toxin | |||