Salmonella enterica subsp. enterica ID105460 |
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Putative Salmonella enterica subsp. enterica ID105460 RM systems
Ref: Schonfeld,J. et al. unpublished
REBASE ref # 28592
Complete sequence: 4,980,665 bp
GenBank #: CP039572
REBASE acronym: Sen5460
Org_num: 34359
All begin E5N96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24310 | endoribonuclease SymE | |||
| 24315 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen5460ORF24320P |
| 24320 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen5460ORF24320P |
| 24325 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen5460ORF24320P |
| 24330 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10540 | drug/metabolite exporter YedA | |||
| 10545 | V | V.StyUK1DcmP (100% identity) | V.Sen5460DcmP | |
| 10550 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen5460DcmP |
| 10555 | phosphohydrolase | |||
| 10815 | RusA family crossover junction | |||
| 10820 | M | M.Ssp17155ORFIP (100% identity) | M.Sen5460ORF10820P | |
| 10825 | PerC family transcriptional regulator | |||
| 14190 | 0 aa hypothetical protein | |||
| 14195 | M | M.StyTORF1914P (100% identity) | M.Sen5460ORF14195P | |
| 14200 | ead/Ea22-like family protein | |||
| 14920 | thermonuclease family protein | |||
| 14925 | M | M.StyCORF187P (49% identity) | M.Sen5460ORF14925P | |
| 14930 | AraC family transcriptional regulator | |||
| 18090 | DNA-binding transcriptional regulator Fis | |||
| 18095 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen5460ORF18095P |
| 18100 | DUF2556 domain-containing protein | |||
| 18585 | ribulose-phosphate 3-epimerase | |||
| 18590 | M | M.StyTDamP (100% identity) | GATC | M.Sen5460DamP |
| 18595 | cell division protein DamX | |||
| 24160 | ATP-binding protein | |||
| 24165 | RM | StyUK1IV (100% identity) | GATCAG | Sen5460ORF24165P |
| 24170 | BREX system P-loop protein BrxC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2275 | MFS transporter | |||
| 2280 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen5460ORF2280P |
| 2285 | R | StyUK1IP (99% identity) | CAGAG | Sen5460ORF2280P |
| 2290 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24325 | type I restriction-modification system | |||
| 24330 | R | StyUK1MrrP (100% identity) | Sen5460MrrP | |
| 24335 | BrnT family toxin | |||