Salmonella enterica subsp. enterica 1607:MR00001R |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica 1607:MR00001R RM systems
Ref: Schonfeld,J. et al. unpublished
REBASE ref # 28592
| Sequence length: | GenBank #: | |
| Chromosome: | 4,976,848 bp | CP039561 |
| plasmid p08-5333.1: | 178,506 bp | CP039562 |
REBASE acronym: Sen001R
Org_num: 34350
All begin E5N88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24260 | endoribonuclease SymE | |||
| 24265 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen001RORF24270P |
| 24270 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen001RORF24270P |
| 24275 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen001RORF24270P |
| 24280 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10425 | drug/metabolite exporter YedA | |||
| 10430 | V | very short patch repair endonuclease | V.Sen001RDcmP | |
| 10435 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen001RDcmP |
| 10440 | phosphohydrolase | |||
| 10700 | RusA family crossover junction | |||
| 10705 | M | M.Ssp17155ORFIP (100% identity) | M.Sen001RORF10705P | |
| 10710 | PerC family transcriptional regulator | |||
| 14070 | 0 aa hypothetical protein | |||
| 14075 | M | M.StyTORF1914P (100% identity) | M.Sen001RORF14075P | |
| 14080 | ead/Ea22-like family protein | |||
| 17115 | replication endonuclease | |||
| 17120 | M | M.SensSZL38ORF19965P (100% identity) | M.Sen001RORF17120P | |
| 17125 | DUF2732 family protein | |||
| 18040 | DNA-binding transcriptional regulator Fis | |||
| 18045 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen001RORF18045P |
| 18050 | DUF2556 domain-containing protein | |||
| 18535 | ribulose-phosphate 3-epimerase | |||
| 18540 | M | adenine-specific DNA-methyltransferase | GATC | M.Sen001RDamP |
| 18545 | cell division protein DamX | |||
| 24110 | ATP-binding protein | |||
| 24115 | RM | StyUK1IV (100% identity) | GATCAG | Sen001RORF24115P |
| 24120 | BREX system P-loop protein BrxC | |||
| plasmid p08-5333.1 | ||||
| 24970 | IS1 family transposase | |||
| 24975 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.Sen001RORF24975P |
| 24980 | R | Ubap201ORF4P (100% identity) | CCWGG | Sen001RORF24975P |
| 24985 | 70 aa hypothetical protein | |||
| 25825 | 59 aa hypothetical protein | |||
| 25830 | M | M.SenST46ORF25580P (100% identity) | M.Sen001RORF25830P | |
| 25835 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2165 | MFS transporter | |||
| 2170 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen001RORF2170P |
| 2175 | R | StyUK1IP (99% identity) | CAGAG | Sen001RORF2170P |
| 2180 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24275 | type I restriction-modification system | |||
| 24280 | R | StyUK1MrrP (100% identity) | Sen001RMrrP | |
| 24285 | BrnT family toxin | |||