Duncaniella species C9 |
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Putative Duncaniella species C9 RM systems
Ref: Miyake,S. et al. unpublished
REBASE ref # 28510
Complete sequence: 3,424,529 bp
GenBank #: CP039547
REBASE acronym: DspC9
Org_num: 34084
All begin E7745_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8795 | site-specific integrase | |||
| 8800 | S | S3.DspB8ORF12510P (100% identity) | S1.DspC9ORF8815P | |
| 8805 | S | S2.MspA4ORF8360P (100% identity) | S2.DspC9ORF8815P | |
| 8810 | S | S1.DspB8ORF12510P (100% identity) | S3.DspC9ORF8815P | |
| 8815 | M | M.MspA4ORF8360P (100% identity) | M.DspC9ORF8815P | |
| 8820 | R | DspB8ORF12510P (100% identity) | DspC9ORF8815P | |
| 8825 | transposase | |||
| 11985 | 228 aa hypothetical protein | |||
| 11990 | M | M.Gme92ORFGP (97% identity) | M.DspC9ORF11990P | |
| 11995 | S | S.Gme92ORFGP (54% identity) | S1.DspC9ORF11990P | |
| 12000 | S | S.Gme92ORFGP (44% identity) | S2.DspC9ORF11990P | |
| 12005 | R | Gme92ORFGP (100% identity) | DspC9ORF11990P | |
| 12010 | DUF3800 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 255 | sigma-54-dependent Fis family transcriptional | |||
| 260 | M | M.DspB8ORF3965P (100% identity) | M.DspC9ORF260P | |
| 265 | 742 aa hypothetical protein | |||
| 390 | helicase | |||
| 395 | RM | DspB8ORF4100P (100% identity) | DspC9ORF395P | |
| 400 | 347 aa hypothetical protein | |||
| 4265 | glutamate--tRNA ligase | |||
| 4270 | M | M.DspB8ORF7980P (100% identity) | M.DspC9ORF4270P | |
| 4275 | R | DspB8ORF7980P (100% identity) | DspC9ORF4270P | |
| 4280 | redox-sensing transcriptional repressor Rex | |||
| 4765 | DUF3127 domain-containing protein | |||
| 4770 | M | M.DspB8ORF8475P (100% identity) | M.DspC9ORF4770P | |
| 4775 | R | DspB8ORF8475P (100% identity) | DspC9ORF4770P | |
| 4780 | 184 aa hypothetical protein | |||
| 7935 | 80 aa hypothetical protein | |||
| 7940 | M | M1.DspB8ORF11645P (100% identity) | M1.DspC9ORF7940P | |
| 7945 | M | M2.DspB8ORF11645P (100% identity) | M2.DspC9ORF7940P | |
| 7950 | 66 aa hypothetical protein | |||
| 8655 | 133 aa hypothetical protein | |||
| 8660 | M | M.DspB8ORF12355P (100% identity) | M.DspC9ORF8660P | |
| 8665 | 68 aa hypothetical protein | |||
| 9140 | 682 aa hypothetical protein | |||
| 9145 | M | M.Bzo33285ORF10725P (78% identity) | M.DspC9ORF9145P | |
| 9150 | 70 aa hypothetical protein | |||
| 11840 | 248 aa hypothetical protein | |||
| 11845 | V | V.DspB8ORF655P (100% identity) | V.DspC9ORF11855P | |
| 11850 | XRE family transcriptional regulator | |||
| 11855 | M | M.DspB8ORF655P (100% identity) | M.DspC9ORF11855P | |
| 11860 | R | DspB8ORF655P (100% identity) | DspC9ORF11855P | |
| 11865 | LlaJI family restriction endonuclease | |||
| 12115 | XRE family transcriptional regulator | |||
| 12120 | M | M.DspB8DndCP (100% identity) | M.DspC9DndCP | |
| 12125 | DNA sulfur modification protein DndD | |||
| 12120 | DNA phosphorothioation system sulfurtransferase | |||
| 12125 | M | M.DspB8DndDP (100% identity) | M.DspC9DndDP | |
| 12130 | DUF1832 domain-containing protein | |||
| 12125 | DNA sulfur modification protein DndD | |||
| 12130 | M | M.DspB8DndEP (100% identity) | M.DspC9DndEP | |
| 12135 | restriction endonuclease | |||
| 12385 | 155 aa hypothetical protein | |||
| 12390 | M | M.DspB8ORF120P (100% identity) | M.DspC9ORF12390P | |
| 12395 | 89 aa hypothetical protein | |||
| 14265 | thymidylate synthase | |||
| 14270 | M | M.DspB8ORF3510P (100% identity) | M.DspC9ORF14270P | |
| 14275 | 126 aa hypothetical protein | |||