Salmonella enterica GTA-FD-2016-MI-02533-1 |
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Putative Salmonella enterica GTA-FD-2016-MI-02533-1 RM systems
Ref: Robertson,J. et al. unpublished
REBASE ref # 28588
Complete sequence: 5,120,962 bp
GenBank #: CP039279
REBASE acronym: Sen25331
Org_num: 34334
All begin EIP70_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16055 | cell filamentation protein Fic | |||
| 16060 | R | Sen25333ORF16070P (100% identity) | Sen25331ORF16075P | |
| 16065 | DUF91 domain-containing protein | |||
| 16070 | S | S.Sen25333ORF16070P (100% identity) | S.Sen25331ORF16075P | |
| 16075 | M | M.Sen25333ORF16070P (100% identity) | M.Sen25331ORF16075P | |
| 16080 | 291 aa hypothetical protein | |||
| 25470 | 64 aa hypothetical protein | |||
| 25475 | S | S.SenSW70ORF19425P (100% identity) | CGCANNNNNNNNTCNG | S.Sen25331ORF25480P |
| 25480 | M | M.Sen80013ORF39990P (100% identity) | CGCANNNNNNNNTCNG | M.Sen25331ORF25480P |
| 25485 | R | Sen80013ORF39990P (100% identity) | CGCANNNNNNNNTCNG | Sen25331ORF25480P |
| 25490 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5555 | 82 aa hypothetical protein | |||
| 5560 | M | M.SenS051ORF14720P (100% identity) | M.Sen25331ORF5560P | |
| 5565 | methyltransferase | |||
| 6020 | phosphohydrolase | |||
| 6025 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen25331DcmP |
| 6030 | V | V.StyUK1DcmP (100% identity) | V.Sen25331DcmP | |
| 6035 | drug/metabolite exporter YedA | |||
| 10320 | RusA family crossover junction | |||
| 10325 | M | M.SenST224ORF7170P (100% identity) | M.Sen25331ORF10325P | |
| 10330 | PerC family transcriptional regulator | |||
| 14195 | 247 aa hypothetical protein | |||
| 14200 | R | Sen25333ORF14200P (100% identity) | Sen25331ORF14205P | |
| 14205 | M | M.Sen25333ORF14200P (100% identity) | M.Sen25331ORF14205P | |
| 14210 | 64 aa hypothetical protein | |||
| 15335 | DEAD/DEAH box helicase | |||
| 15340 | RM | Sma1978ORFHP (99% identity) | CTTGAC | Sen25331ORF15340P |
| 15345 | IS66 family transposase | |||
| 19110 | DNA-binding transcriptional regulator Fis | |||
| 19115 | M | M.Sen80013ORF4570P (100% identity) | ATGCAT | M.Sen25331ORF19115P |
| 19120 | DUF2556 domain-containing protein | |||
| 19595 | ribulose-phosphate 3-epimerase | |||
| 19600 | M | M.StyTDamP (100% identity) | GATC | M.Sen25331DamP |
| 19605 | cell division protein DamX | |||
| 25315 | 64 aa hypothetical protein | |||
| 25320 | R | Sen01066ORF20715P (100% identity) | Sen25331ORF25320P | |
| 25325 | RNA polymerase subunit sigma | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2210 | MFS transporter | |||
| 2215 | M | M.SenSW70ORF17195P (100% identity) | CAGAG | M.Sen25331ORF2215P |
| 2220 | R | Sen80013ORF35070P (100% identity) | CAGAG | Sen25331ORF2215P |
| 2225 | 33 aa hypothetical protein | |||
| 11045 | DUF4102 domain-containing protein | |||
| 11050 | M | M.Sen25333ORF11050P (100% identity) | CCGAG | M.Sen25331ORF11050P |
| 11055 | R | Sen25333ORF11050P (100% identity) | CCGAG | Sen25331ORF11050P |
| 11060 | shufflon system plasmid conjugative transfer | |||
| 15165 | inovirus Gp2 family protein | |||
| 15170 | R | Sen80013ORF11280P (100% identity) | Sen25331ORF15175P | |
| 15175 | M | M.Sen5006ORF16245P (100% identity) | M.Sen25331ORF15175P | |
| 15180 | Cd(II)/Pb(II)-responsive transcriptional | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25485 | type I restriction-modification system | |||
| 25490 | R | StyTMrrP (100% identity) | Sen25331MrrP | |
| 25495 | BrnT family toxin | |||