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Putative Salmonella enterica subsp. enterica serovar Senftenberg GTA-FD-2016-MI-02533-3 RM systems
Ref: Robertson,J. et al. unpublished
REBASE ref # 28588
Complete sequence: 5,120,648 bp
GenBank #: CP038608
REBASE acronym: Sen25333
Org_num: 34395
All begin EIO66_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
16050 | cell filamentation protein Fic | |||
16055 | R | Sen25332ORF16075P (100% identity) | Sen25333ORF16070P | |
16060 | DUF91 domain-containing protein | |||
16065 | S | S.Sen25332ORF16075P (100% identity) | S.Sen25333ORF16070P | |
16070 | M | M.Sen25332ORF16075P (100% identity) | M.Sen25333ORF16070P | |
16075 | 291 aa hypothetical protein | |||
25460 | 64 aa hypothetical protein | |||
25465 | S | S.SenSW70ORF19425P (100% identity) | CGCANNNNNNNNTCNG | S.Sen25333ORF25470P |
25470 | M | M.Sen80013ORF39990P (100% identity) | CGCANNNNNNNNTCNG | M.Sen25333ORF25470P |
25475 | R | Sen80013ORF39990P (100% identity) | CGCANNNNNNNNTCNG | Sen25333ORF25470P |
25480 | restriction endonuclease | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
5555 | 82 aa hypothetical protein | |||
5560 | M | M.SenS051ORF14720P (100% identity) | M.Sen25333ORF5560P | |
5565 | methyltransferase | |||
6020 | phosphohydrolase | |||
6025 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen25333DcmP |
6030 | V | V.StyUK1DcmP (100% identity) | V.Sen25333DcmP | |
6035 | drug/metabolite exporter YedA | |||
10320 | RusA family crossover junction | |||
10325 | M | M.SenST224ORF7170P (100% identity) | M.Sen25333ORF10325P | |
10330 | PerC family transcriptional regulator | |||
14190 | 247 aa hypothetical protein | |||
14195 | R | Sen25332ORF14205P (100% identity) | Sen25333ORF14200P | |
14200 | M | M.Sen25332ORF14205P (100% identity) | M.Sen25333ORF14200P | |
14205 | 64 aa hypothetical protein | |||
15330 | DEAD/DEAH box helicase | |||
15335 | RM | Sma1978ORFHP (99% identity) | CTTGAC | Sen25333ORF15335P |
15340 | IS66 family transposase | |||
19105 | DNA-binding transcriptional regulator Fis | |||
19110 | M | M.Sen80013ORF4570P (100% identity) | ATGCAT | M.Sen25333ORF19110P |
19115 | DUF2556 domain-containing protein | |||
19590 | ribulose-phosphate 3-epimerase | |||
19595 | M | M.StyTDamP (100% identity) | GATC | M.Sen25333DamP |
19600 | cell division protein DamX | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
2210 | MFS transporter | |||
2215 | M | M.SenSW70ORF17195P (100% identity) | CAGAG | M.Sen25333ORF2215P |
2220 | R | Sen80013ORF35070P (100% identity) | CAGAG | Sen25333ORF2215P |
2225 | 33 aa hypothetical protein | |||
11045 | DUF4102 domain-containing protein | |||
11050 | M | M.Sen25332ORF11050P (100% identity) | CCGAG | M.Sen25333ORF11050P |
11055 | R | Sen25332ORF11050P (100% identity) | CCGAG | Sen25333ORF11050P |
11060 | shufflon system plasmid conjugative transfer | |||
15160 | inovirus Gp2 family protein | |||
15165 | R | Sen80013ORF11280P (100% identity) | Sen25333ORF15170P | |
15170 | M | M.Sen5006ORF16245P (100% identity) | M.Sen25333ORF15170P | |
15175 | Cd(II)/Pb(II)-responsive transcriptional | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
25475 | type I restriction-modification system | |||
25480 | R | StyTMrrP (100% identity) | Sen25333MrrP | |
25485 | BrnT family toxin |