Salmonella enterica subsp. enterica serovar Hadar 12-2388 |
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Putative Salmonella enterica subsp. enterica serovar Hadar 12-2388 RM systems
Ref: Robertson,J. et al. unpublished
REBASE ref # 28588
Complete sequence: 4,633,429 bp
GenBank #: CP038595
REBASE acronym: Sen22388
Org_num: 34389
All begin CVJ63_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22330 | endoribonuclease SymE | |||
| 22335 | S | S.SenT075BORF19680P (100% identity) | CACNNNNNNNRTANYC | S.Sen22388ORF22340P |
| 22340 | M | M.SenT075BORF19680P (100% identity) | CACNNNNNNNRTANYC | M.Sen22388ORF22340P |
| 22345 | R | SenT075BORF19680P (100% identity) | CACNNNNNNNRTANYC | Sen22388ORF22340P |
| 22350 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9925 | drug/metabolite exporter YedA | |||
| 9930 | V | V.StyUK1DcmP (100% identity) | V.Sen22388DcmP | |
| 9935 | M | M.SenWC81DcmP (100% identity) | CCWGG | M.Sen22388DcmP |
| 9940 | phosphohydrolase | |||
| 16615 | DNA-binding transcriptional regulator Fis | |||
| 16620 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.Sen22388ORF16620P |
| 16625 | DUF2556 domain-containing protein | |||
| 17105 | ribulose-phosphate 3-epimerase | |||
| 17110 | M | adenine-specific DNA-methyltransferase | GATC | M.Sen22388DamP |
| 17115 | cell division protein DamX | |||
| 22165 | DUF4102 domain-containing protein | |||
| 22170 | M | M.SenT075BORF19850P (99% identity) | M.Sen22388ORF22170P | |
| 22175 | R | SenT075BORF19850P (99% identity) | Sen22388ORF22170P | |
| 22180 | 0 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1890 | MFS transporter | |||
| 1895 | M | M.SenT075BORF17425P (100% identity) | CAGAG | M.Sen22388ORF1895P |
| 1900 | R | SenT075BORF17425P (100% identity) | CAGAG | Sen22388ORF1895P |
| 1905 | 33 aa hypothetical protein | |||