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Putative Acidovorax avenae subsp. avenae ATCC 19860 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 12207
Sequence length: | GenBank #: | |
Chromosome: | 5,428,809 bp | ADCB00000000 |
Chromosome: | 5,482,170 bp | CP002521 (NC_015138) |
REBASE acronym: Aav19860
Org_num: 6449
All begin Acav_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
4670 | single-strand binding protein | |||
4671 | R | AavAA811ORF6650P (97% identity) | Aav19860ORF4671P | |
4672 | filamentation induced by cAMP protein Fic | |||
4673 | 313 aa hypothetical protein | |||
4674 | 289 aa hypothetical protein | |||
4675 | 206 aa hypothetical protein | |||
4676 | S | S.Csp1121ORF21560P (41% identity) | S.Aav19860ORF4671P | |
4677 | M | M.AavAA785ORF20885P (98% identity) | M.Aav19860ORF4671P | |
4678 | transcriptional regulator, LysR family | |||
4 | 195 aa hypothetical protein | |||
5 | M | M.Asp1281ORF25P (74% identity) | M1.Aav19860ORF5P | |
6 | Abi family protein | |||
7 | M | M.SspXGS7ORF4040P (90% identity) | M2.Aav19860ORF5P | |
8 | S | S.Pca852011ORF11545P (42% identity) | S.Aav19860ORF5P | |
9 | 308 aa hypothetical protein | |||
10 | R | SspXGS7ORF4040P (90% identity) | Aav19860ORF5P | |
11 | protein of unknown function DUF45 | |||
Chromosome | ||||
4 | 195 aa hypothetical protein | |||
5 | M | M.Asp1281ORF25P (74% identity) | M1.Aav19860ORF5P | |
6 | Abi family protein | |||
7 | M | M.SspXGS7ORF4040P (90% identity) | M2.Aav19860ORF5P | |
8 | S | S.Pca852011ORF11545P (42% identity) | S.Aav19860ORF5P | |
9 | 308 aa hypothetical protein | |||
10 | R | SspXGS7ORF4040P (90% identity) | Aav19860ORF5P | |
11 | protein of unknown function DUF45 | |||
4670 | single-strand binding protein | |||
4671 | R | AavAA811ORF6650P (97% identity) | Aav19860ORF4671P | |
4672 | filamentation induced by cAMP protein Fic | |||
4673 | 313 aa hypothetical protein | |||
4674 | 289 aa hypothetical protein | |||
4675 | 206 aa hypothetical protein | |||
4676 | S | S.Csp1121ORF21560P (41% identity) | S.Aav19860ORF4671P | |
4677 | M | M.AavAA785ORF20885P (98% identity) | M.Aav19860ORF4671P | |
4678 | transcriptional regulator, LysR family | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
4429 | Abortive phage infection protein | |||
4430 | V | V.AavAA811ORF7870P (100% identity) | V.Aav19860ORF4431P | |
4431 | M | M.AavAA811ORF7870P (100% identity) | M.Aav19860ORF4431P | |
4432 | 222 aa hypothetical protein | |||
625 | two component transcriptional regulator, LuxR | |||
626 | R | AavAA811ORF3020P (97% identity) | GTCGAC | Aav19860ORF627P |
627 | M | M.AavAA811ORF3020P (99% identity) | GTCGAC | M.Aav19860ORF627P |
628 | major facilitator superfamily MFS_1 | |||
Chromosome | ||||
625 | two component transcriptional regulator, LuxR | |||
626 | R | AavAA811ORF3020P (97% identity) | GTCGAC | Aav19860ORF627P |
627 | M | M.AavAA811ORF3020P (99% identity) | GTCGAC | M.Aav19860ORF627P |
628 | major facilitator superfamily MFS_1 | |||
4429 | Abortive phage infection protein | |||
4430 | V | V.AavAA811ORF7870P (100% identity) | V.Aav19860ORF4431P | |
4431 | M | M.AavAA811ORF7870P (100% identity) | M.Aav19860ORF4431P | |
4432 | 222 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1413 | transposase IS4 family protein | |||
1414 | R | AciTw6MrrP (88% identity) | Aav19860MrrP | |
1415 | 143 aa hypothetical protein | |||
Chromosome | ||||
1413 | transposase IS4 family protein | |||
1414 | R | AciTw6MrrP (88% identity) | Aav19860MrrP | |
1415 | 143 aa hypothetical protein |