Xanthomonas campestris pv. campestris 8004 |
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Putative Xanthomonas campestris pv. campestris 8004 RM systems
Ref: Qian,W. et al. Genome Res. 15 (6), 757-767 (2005)
REBASE ref # 8987
Complete sequence: 5,148,708 bp
GenBank #: CP000050 (NC_007086)
REBASE acronym: Xca8004
Org_num: 4132
All begin XC_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 475 | 121 aa conserved hypothetical protein | |||
| 476 | R | Xcacc2ORF2325P (100% identity) | Xca8004ORF480P | |
| 477 | S | S.Xcacc2ORF2325P (100% identity) | S.Xca8004ORF480P | |
| 478 | anticodon nuclease | |||
| 479 | DNA-binding protein | |||
| 480 | M | M.Xcacc2ORF2325P (100% identity) | M.Xca8004ORF480P | |
| 481 | anthranilate synthase component II | |||
| 1203 | 248 aa conserved hypothetical protein | |||
| 1204 | R | Xcacc2ORF6130P (100% identity) | Xca8004ORF1207P | |
| 1205 | S | S.Xcacc2ORF6130P (100% identity) | S.Xca8004ORF1207P | |
| 1206 | DNA-damage-inducible protein d | |||
| 1207 | M | M.Xcacc2ORF6130P (100% identity) | M.Xca8004ORF1207P | |
| 1208 | 198 aa conserved hypothetical protein | |||
| 3179 | 98 aa conserved hypothetical protein | |||
| 3180 | R | Xcacc2ORF16555P (100% identity) | Xca8004ORF3183P | |
| 3181 | S | S.Xcacc2ORF16555P (100% identity) | S.Xca8004ORF3183P | |
| 3182 | virulence protein | |||
| 3183 | M | M.Xcacc2ORF16555P (100% identity) | M.Xca8004ORF3183P | |
| 3184 | Mrr restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2062 | 75 aa conserved hypothetical protein | |||
| 2063 | M | M.Xcacc2ORF10650P (100% identity) | M.Xca8004ORF2063P | |
| 2064 | DNA topoisomerase III | |||
| 2075 | transcriptional regulator, HTH_3 family | |||
| 2076 | RM | Xcacc2ORF10730P (100% identity) | Xca8004ORF2076P | |
| 2078 | YeeB-like protein | |||
| 3912 | 97 aa conserved hypothetical protein | |||
| 3913 | R | Xcacc2ORF20495P (100% identity) | Xca8004ORF3913P | |
| 3914 | IS1404 transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 223 | 387 aa conserved hypothetical protein | |||
| 224 | M | M.Xcacc2ORF915P (100% identity) | M.Xca8004ORF224P | |
| 225 | R | Xcacc2ORF915P (100% identity) | Xca8004ORF224P | |
| 226 | haloalkane dehalogenase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1379 | 71 aa conserved hypothetical protein | |||
| 1380 | R | Xcacc2McrBP (100% identity) | Xca8004McrBP | |
| 1381 | R | Xcacc2McrCP (100% identity) | Xca8004McrCP | |
| 1382 | sensor histidine kinase | |||
| 3183 | type I restriction-modification system, M | |||
| 3184 | R | Xcacc2MrrP (100% identity) | Xca8004MrrP | |
| 3185 | 102 aa conserved hypothetical protein | |||
| 4278 | pseudouridylate synthase | |||
| ??? | R | XcaXca5Mrr2P (100% identity) | Xca8004Mrr2P | |
| 4279 | IS1481 transposase | |||