Escherichia coli CJ236 |
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Putative Escherichia coli CJ236 RM systems
Ref: Bhagwat,A.S. and Sakhtemani,R. unpublished
REBASE ref # 28567
Complete sequence: 4,641,652 bp
GenBank #: CP029238
REBASE acronym: EcoCJ236
Org_num: 34294
All begin DF192_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23680 | endoribonuclease SymE | |||
| 23685 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoCJ236ORF23690P |
| 23690 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoCJ236ORF23690P |
| 23695 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | EcoCJ236ORF23690P |
| 23700 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10770 | drug/metabolite exporter YedA | |||
| 10775 | V | V.SflFF64DcmP (100% identity) | V.EcoCJ236DcmP | |
| 10780 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoCJ236DcmP |
| 10785 | phosphohydrolase | |||
| 17730 | Fis family transcriptional regulator | |||
| 17735 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoCJ236ORF17735P |
| 17740 | DUF2556 domain-containing protein | |||
| 18395 | ribulose-phosphate 3-epimerase | |||
| 18400 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoCJ236DamP |
| 18405 | protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6305 | DNA-invertase from lambdoid prophage e14 | |||
| 6310 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoCJ236ORF6310P |
| 6315 | isocitrate dehydrogenase | |||
| 23665 | 906 aa hypothetical protein | |||
| 23670 | R | SenHNK130McrCP (100% identity) | EcoCJ236McrCP | |
| 23675 | R | SenHNK130McrBP (100% identity) | EcoCJ236McrBP | |
| 23680 | endoribonuclease SymE | |||
| 23695 | type I restriction-modification system | |||
| 23700 | R | SenHNK130MrrP (100% identity) | EcoCJ236MrrP | |
| 23705 | GTPase | |||