Weissella species 26KH-42 |
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Putative Weissella species 26KH-42 RM systems
Ref: Heo,J. et al. unpublished
REBASE ref # 28173
Complete sequence: 3,020,651 bp
GenBank #: CP037940
REBASE acronym: WspKH42
Org_num: 34014
All begin EQG49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4510 | 286 aa hypothetical protein | |||
| 4515 | R | LmeP45ORF890P (77% identity) | GACNNNNGTG | WspKH42IP |
| 4520 | S | S.Mbo3ORF8970P (23% identity) | S3.WspKH42IP | |
| 4525 | S | restriction endonuclease subunit S | S2.WspKH42IP | |
| 4530 | integrase | |||
| 4535 | S | S.Mbo3ORF8970P (27% identity) | GACNNNNGTG | S1.WspKH42I |
| 4540 | M | M.Wci3C5ORF9260P (83% identity) | GACNNNNGTG | M2.WspKH42I |
| 4545 | M | M.LmeMGORF1303P (42% identity) | GACNNNNGTG | M1.WspKH42I |
| 4550 | 192 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11795 | sigma-70 family RNA polymerase sigma factor | |||
| 11800 | M | DNA adenine methylase | M1.WspKH42ORF11800P | |
| 11805 | M | M1.EfaPLM3ORF7530P (52% identity) | M2.WspKH42ORF11800P | |
| 11810 | R | WciM2ORF523P (55% identity) | WspKH42ORF11800P | |
| 11815 | 158 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8920 | CPBP family intramembrane metalloprotease | |||
| 8925 | R | LvaLB9ORF795P (32% identity) | WspKH42ORF8925P | |
| 8930 | DUF1093 domain-containing protein | |||
| 11780 | 215 aa hypothetical protein | |||
| 11785 | R | restriction endonuclease | WspKH42MrrP | |
| 11790 | 76 aa hypothetical protein | |||