Xanthomonas oryzae pv. oryzae PXO421 |
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Putative Xanthomonas oryzae pv. oryzae PXO421 RM systems
Ref: Huguet-Tapia,J.C. et al. unpublished
REBASE ref # 28611
Complete sequence: 4,909,962 bp
GenBank #: CP033189
REBASE acronym: Xor421
Org_num: 34424
All begin EBA24_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17950 | 88 aa hypothetical protein | |||
| 17955 | R | XorPXO61ORF18385P (100% identity) | Xor421ORF17980P | |
| 17960 | 224 aa hypothetical protein | |||
| 17965 | 248 aa hypothetical protein | |||
| 17970 | S | S.XorPXO61ORF18385P (100% identity) | S.Xor421ORF17980P | |
| 17975 | 144 aa hypothetical protein | |||
| 17980 | M | M.XorPXO61ORF18385P (100% identity) | M.Xor421ORF17980P | |
| 17985 | restriction endonuclease | |||
| 17995 | 0 aa hypothetical protein | |||
| 18000 | R | Xor513ORF18040P (100% identity) | Xor421ORF18010P | |
| 18005 | Abi family protein | |||
| 18010 | M | M.XorZ173ORF6395P (100% identity) | M.Xor421ORF18010P | |
| ??? | S | S1.XorZ173ORF6395P (100% identity) | S.Xor421ORF18010P | |
| 18025 | type II toxin-antitoxin system RelE/ParE family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3165 | plasmid mobilization relaxosome protein MobC | |||
| 3170 | V | V.XorPXO61ORF3170P (100% identity) | V.Xor421ORF3175P | |
| 3175 | M | M.XorPXO61ORF3170P (100% identity) | CGATCG | M.Xor421ORF3175P |
| 3180 | R | XorO79ORF8580P (100% identity) | CGATCG | Xor421ORF3175P |
| 3185 | integrase | |||
| 19535 | ISL3 family transposase | |||
| 19540 | R | XorYNCXORF6545P (100% identity) | CGGCCG | Xor421ORF19545P |
| 19545 | M | M.Xor99AgORF6590P (100% identity) | CGGCCG | M.Xor421ORF19545P |
| 19550 | SMP-30/gluconolactonase/LRE family protein | |||
| 20710 | PDZ domain-containing protein | |||
| 20715 | R | XorYC11ORF20530P (100% identity) | CTGCAG | Xor421ORF20720P |
| 20720 | M | M.XorZ173ORF3935P (100% identity) | CTGCAG | M.Xor421ORF20720P |
| 20725 | lipoyl synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22110 | Fic family protein | |||
| 22115 | M | M.XorZ173ORF2630P (100% identity) | CCGAGG | M.Xor421ORF22115P |
| 22120 | R | XorYcbORF21955P (100% identity) | CCGAGG | Xor421ORF22115P |
| 22125 | alpha/beta fold hydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17980 | SAM-dependent DNA methyltransferase | |||
| 17985 | R | XorZ173MrrP (93% identity) | Xor421MrrP | |
| 17990 | type II toxin-antitoxin system RelE/ParE family | |||