Xanthomonas oryzae pv. oryzae PXO404 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Xanthomonas oryzae pv. oryzae PXO404 RM systems
Ref: Huguet-Tapia,J.C. et al. unpublished
REBASE ref # 28611
Complete sequence: 4,914,700 bp
GenBank #: CP033190
REBASE acronym: Xor404
Org_num: 34432
All begin EBA23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17975 | 88 aa hypothetical protein | |||
| 17980 | R | XorPXO61ORF18385P (100% identity) | Xor404ORF18005P | |
| 17985 | 224 aa hypothetical protein | |||
| 17990 | 248 aa hypothetical protein | |||
| 17995 | S | S.XorPXO61ORF18385P (100% identity) | S.Xor404ORF18005P | |
| 18000 | 144 aa hypothetical protein | |||
| 18005 | M | M.XorPXO61ORF18385P (100% identity) | M.Xor404ORF18005P | |
| 18010 | restriction endonuclease | |||
| 18020 | 0 aa hypothetical protein | |||
| 18025 | R | Xor513ORF18040P (100% identity) | Xor404ORF18035P | |
| 18030 | Abi family protein | |||
| 18035 | M | M.XorZ173ORF6395P (100% identity) | M.Xor404ORF18035P | |
| ??? | S | S1.XorZ173ORF6395P (100% identity) | S.Xor404ORF18035P | |
| 18050 | type II toxin-antitoxin system RelE/ParE family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3160 | plasmid mobilization relaxosome protein MobC | |||
| 3165 | V | V.XorPXO61ORF3170P (100% identity) | V.Xor404ORF3170P | |
| 3170 | M | M.XorPXO61ORF3170P (100% identity) | CGATCG | M.Xor404ORF3170P |
| 3175 | R | XorO79ORF8580P (100% identity) | CGATCG | Xor404ORF3170P |
| 3180 | integrase | |||
| 19560 | ISL3 family transposase | |||
| 19565 | R | XorYNCXORF6545P (100% identity) | CGGCCG | Xor404ORF19570P |
| 19570 | M | M.Xor99AgORF6590P (100% identity) | CGGCCG | M.Xor404ORF19570P |
| 19575 | SMP-30/gluconolactonase/LRE family protein | |||
| 20735 | PDZ domain-containing protein | |||
| 20740 | R | XorYC11ORF20530P (100% identity) | CTGCAG | Xor404ORF20745P |
| 20745 | M | M.XorZ173ORF3935P (100% identity) | CTGCAG | M.Xor404ORF20745P |
| 20750 | lipoyl synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22135 | Fic family protein | |||
| 22140 | M | M.XorZ173ORF2630P (100% identity) | M.Xor404ORF22140P | |
| 22145 | R | XorYcbORF21955P (100% identity) | Xor404ORF22140P | |
| 22150 | alpha/beta fold hydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18005 | SAM-dependent DNA methyltransferase | |||
| 18010 | R | XorZ173MrrP (93% identity) | Xor404MrrP | |
| 18015 | type II toxin-antitoxin system RelE/ParE family | |||