Salmonella enterica subsp. enterica serovar 4,[5],12:i:- L-3841 |
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Putative Salmonella enterica subsp. enterica serovar 4,[5],12:i:- L-3841 RM systems
Ref: Sekizuka,T. et al. unpublished
REBASE ref # 28597
Complete sequence: 4,979,397 bp
GenBank #: AP019375
REBASE acronym: Sen3841
Org_num: 34366
All begin STL3841_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 38690 | restriction endonuclease | |||
| 38700 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen3841ORF38710P |
| 38710 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen3841ORF38710P |
| 38720 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen3841ORF38710P |
| 38730 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3540 | cell division protein DamX | |||
| 3550 | M | M.StyTDamP (100% identity) | GATC | M.Sen3841DamP |
| 3560 | ribulose-phosphate 3-epimerase | |||
| 4460 | DUF2556 domain-containing protein | |||
| 4470 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen3841ORF4470P |
| 4480 | Fis family transcriptional regulator | |||
| 6300 | DUF2732 domain phage protein | |||
| 6310 | M | M.SensSZL38ORF19965P (100% identity) | M.Sen3841ORF6310P | |
| 6320 | phage replication protein A | |||
| 11880 | Ead/Ea22-like protein | |||
| 11890 | M | M.StyTORF1914P (100% identity) | M.Sen3841ORF11890P | |
| 11900 | uncharacterized protein | |||
| 18200 | phage protein | |||
| 18210 | M | M.Ssp17155ORFIP (100% identity) | M.Sen3841ORF18210P | |
| 18220 | RusA family endonuclease protein | |||
| 18670 | phosphohydrolase | |||
| 18680 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen3841DcmP |
| 18690 | V | V.StyUK1DcmP (100% identity) | V.Sen3841DcmP | |
| 18700 | inner membrane transporter YedA | |||
| 39020 | DNA repair protein | |||
| 39030 | RM | StyUK1IV (100% identity) | GATCAG | Sen3841ORF39030P |
| 39040 | AAA domain protein | |||
| 42750 | LexA family transcriptional regulator | |||
| 42760 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen3841ORF42760P |
| 42770 | phage protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 34250 | 33 aa hypothetical protein | |||
| 34260 | R | StyUK1IP (99% identity) | CAGAG | Sen3841ORF34270P |
| 34270 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen3841ORF34270P |
| 34280 | sialic acid transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 38680 | toxin ShpA of toxin-antitoxin (TA) system | |||
| 38690 | R | StyUK1MrrP (100% identity) | Sen3841MrrP | |
| 38700 | type I restriction-modification system | |||