Prevotella intermedia KCOM 2069 |
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Putative Prevotella intermedia KCOM 2069 RM systems
Ref: Kook,J.-K. et al. unpublished
REBASE ref # 24621
GenBank #: PESN00000000
REBASE acronym: Pin2069
Org_num: 34000
All begin CUC04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8255 | R | PinWW855ORF6635P (72% identity) | Pin2069ORF8255P | |
| 8260 | transcriptional regulator | |||
| 12045 | restriction endonuclease subunit S | |||
| 12050 | S | S2.Pgi2796ORF7220P (99% identity) | S3.Pin2069IP | |
| 12055 | S | S2.Pin2834ORF11205P (92% identity) | S2.Pin2069IP | |
| 12060 | S | S4.Pgi2796ORF7220P (95% identity) | GAGNNNNNGRT | S1.Pin2069I |
| 12065 | cell filamentation protein Fic | |||
| 12070 | M | M.Pin2834ORF11205P (98% identity) | GAGNNNNNGRT | M.Pin2069I |
| 12075 | DUF262 domain-containing protein | |||
| ??? | R | Pin2836ORF11600P (11% identity) | GAGNNNNNGRT | Pin2069IP |
| 12040 | site-specific integrase | |||
| 12045 | S | S1.Pgi2796ORF7220P (55% identity) | CAGNNNNNRTAA | S.Pin2069II |
| 12050 | 166 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11795 | transcriptional regulator | |||
| 11800 | M | M.Pme0300ORF9350P (68% identity) | M.Pin2069ORF11800P | |
| 11805 | RM | Pme0695ORF10870P (75% identity) | Pin2069ORF11800P | |
| 11810 | 565 aa hypothetical protein | |||
| 11255 | 565 aa hypothetical protein | |||
| 11260 | RM | Pme0695ORF10870P (75% identity) | Pin2069ORF11800P | |
| 11265 | M | M.Pme0300ORF9350P (68% identity) | M.Pin2069ORF11800P | |
| 11270 | transcriptional regulator | |||
| 6970 | DUF4294 domain-containing protein | |||
| 6975 | R | Pin2836ORF4190P (99% identity) | Pin2069ORF6980P | |
| 6980 | M | M.Pin1653ORF2740P (99% identity) | M.Pin2069ORF6980P | |
| 6985 | polyketide cyclase | |||
| 7455 | DUF2147 domain-containing protein | |||
| 7465 | RM | PinWW414ORF8500P (99% identity) | Pin2069ORF7465P | |
| 7470 | mobilization protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11445 | ATP-binding protein | |||
| 11450 | M | M.Beg20697ORF15995P (95% identity) | M.Pin2069ORF11450P | |
| 11455 | XRE family transcriptional regulator | |||
| 8395 | XRE family transcriptional regulator | |||
| 8400 | M | M.Beg20697ORF15995P (95% identity) | M.Pin2069ORF11450P | |
| 8405 | ATP-binding protein | |||
| 10245 | 73 aa hypothetical protein | |||
| 10250 | R | Pin17FMcrCP (97% identity) | Pin2069McrCP | |
| 10255 | R | Pin1949McrBP (98% identity) | Pin2069McrBP | |
| 10265 | pseudogene | |||