Prevotella intermedia KCOM 2698 |
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Putative Prevotella intermedia KCOM 2698 RM systems
Ref: Kook,J.-K. et al. unpublished
REBASE ref # 24621
GenBank #: PENF00000000
REBASE acronym: Pin2698
Org_num: 34002
All begin CTM53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9395 | site-specific integrase | |||
| 9400 | S | S1.Pin2069I (86% identity) | S4.Pin2698ORF9425P | |
| 9405 | S | S4.Pin2836ORF11600P (50% identity) | S3.Pin2698ORF9425P | |
| 9410 | S | S2.Pin2836ORF11600P (93% identity) | S2.Pin2698ORF9425P | |
| 9415 | S | S1.Pin2836ORF11600P (60% identity) | S1.Pin2698ORF9425P | |
| 9420 | cell filamentation protein Fic | |||
| 9425 | M | M.Pin2836ORF11600P (99% identity) | M.Pin2698ORF9425P | |
| 9430 | DUF262 domain-containing protein | |||
| 9435 | R | Pin2836ORF11600P (100% identity) | Pin2698ORF9425P | |
| 9440 | C | C.PinWW414ORF5835P (100% identity) | C.Pin2698ORF9425P | |
| 9445 | helicase | |||
| 10285 | nicotinamidase | |||
| 10290 | M | M.Pin1653I (98% identity) | M.Pin2698ORF10290P | |
| 10295 | S | S.Pin2734I (68% identity) | S.Pin2698ORF10290P | |
| 10300 | R | Pin2836ORF10700P (99% identity) | Pin2698ORF10290P | |
| 10310 | zinc-dependent metalloprotease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5575 | 211 aa hypothetical protein | |||
| 5580 | R | Pin2836ORF4190P (100% identity) | Pin2698ORF5585P | |
| 5585 | M | M.Pin2836ORF4190P (99% identity) | M.Pin2698ORF5585P | |
| 5590 | polyketide cyclase | |||
| 6205 | ABC transporter ATP-binding protein | |||
| 6210 | RM | Pin2836ORF3495P (100% identity) | Pin2698ORF6210P | |
| 6215 | site-specific DNA-methyltransferase | |||
| 6210 | N-6 DNA methylase | |||
| 6215 | M | M.Pin2836I (100% identity) | CTSAG | M.Pin2698I |
| 6220 | XRE family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7150 | cell filamentation protein Fic | |||
| 7155 | R | Pin2836ORF2550P (100% identity) | Pin2698ORF7160P | |
| 7160 | M | M.Pin2836ORF2550P (100% identity) | M.Pin2698ORF7160P | |
| 7165 | 1167 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10730 | 65 aa hypothetical protein | |||
| 10735 | R | Pin1945McrBP (74% identity) | Pin2698McrBP | |
| 10740 | R | Pin2833McrCP (97% identity) | Pin2698McrCP | |
| 10745 | 0 aa hypothetical protein | |||