Prevotella intermedia KCOM 1653 |
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Putative Prevotella intermedia KCOM 1653 RM systems
Ref: Kook,J.-K. et al. unpublished
REBASE ref # 24621
Contig set: 2,951,033 bp
GenBank #: PEKN00000000 (NZ_PEKN00000000)
REBASE acronym: Pin1653
Org_num: 33996
All begin CTI18_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10825 | AraC family transcriptional regulator | |||
| 10830 | R | Pin14ORF436P (99% identity) | GAGNNNNRTTA | Pin1653IP |
| 10835 | S | S.Pin1949ORF9185P (59% identity) | GAGNNNNRTTA | S.Pin1653I |
| 10840 | M | M.Pin2836ORF10700P (99% identity) | GAGNNNNRTTA | M.Pin1653I |
| 10845 | nicotinamidase | |||
| 3380 | transcriptional regulator | |||
| 3385 | R | BunC05ORF4593P (90% identity) | CTAYNNNNNYTC | Pin1653IIP |
| 3390 | M | M.BunC05ORF4593P (95% identity) | CTAYNNNNNYTC | M.Pin1653II |
| 3395 | 552 aa hypothetical protein | |||
| 3400 | S | S5.Bsp737ORF2980P (37% identity) | CTAYNNNNNYTC | S1.Pin1653II |
| 3405 | S | S2.Pin2734IIP (75% identity) | S2.Pin1653IIP | |
| 3410 | S | S1.Pme3C08ORF2021P (35% identity) | S3.Pin1653IIP | |
| 3415 | S | S2.Bfa554ORF12905P (70% identity) | S4.Pin1653IIP | |
| 3420 | site-specific integrase | |||
| 3475 | transcriptional regulator | |||
| 3480 | M | M1.Mba108610ORFNP (93% identity) | M1.Pin1653ORF3480P | |
| 3485 | M | M2.Mba108610ORFNP (76% identity) | M2.Pin1653ORF3480P | |
| 3490 | S | S2.Bth7853ORF13925P (33% identity) | S1.Pin1653ORF3480P | |
| 3495 | ABC transporter ATP-binding protein | |||
| 3500 | integrase | |||
| 3505 | S | S.PjeF0106VIII (21% identity) | S2.Pin1653ORF3480P | |
| 3510 | R | PbrB14IP (97% identity) | Pin1653ORF3480P | |
| 3515 | 501 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1405 | IS30 family transposase | |||
| 1410 | M | M.Pin1741ORF1745P (95% identity) | M.Pin1653ORF1410P | |
| 1415 | 80 aa hypothetical protein | |||
| 10960 | 199 aa hypothetical protein | |||
| 10965 | R | Pin2834ORF1385P (99% identity) | Pin1653ORF10970P | |
| 10970 | M | M.Pin2834ORF1385P (99% identity) | M.Pin1653ORF10970P | |
| 10975 | NADH-quinone oxidoreductase subunit N | |||
| 12100 | transcriptional regulator | |||
| 12105 | M | M.Pje697ORF9745P (99% identity) | M.Pin1653ORF12105P | |
| 12110 | ATP-binding protein | |||
| 12115 | R | CcaCc5ORF330P (55% identity) | Pin1653ORF12105P | |
| 12120 | 310 aa hypothetical protein | |||
| 2735 | polyketide cyclase | |||
| 2740 | M | M.Pin1949ORF1640P (99% identity) | M.Pin1653ORF2740P | |
| 2745 | R | Pin1741ORF3080P (99% identity) | Pin1653ORF2740P | |
| 2750 | DUF4294 domain-containing protein | |||
| 3090 | prolipoprotein diacylglyceryl transferase | |||
| 3095 | M | M.Pin1779ORF5310P (99% identity) | M.Pin1653ORF3095P | |
| 3100 | HNH endonuclease | |||
| 3095 | modification methylase | |||
| 3100 | R | PinWW414ORF9365P (98% identity) | Pin1653ORF3100P | |
| 3105 | 74 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9880 | 59 aa hypothetical protein | |||
| 9885 | R | Pni103McrCP (97% identity) | Pin1653McrCP | |
| 9890 | R | Pin2836McrBP (66% identity) | Pin1653McrBP | |
| 9895 | polyketide cyclase | |||