Acidithiobacillus species GGI-221 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Acidithiobacillus species GGI-221 RM systems
Ref: Bagatharia,S.B. et al. unpublished
REBASE ref #
GenBank #: AEFB00000000
REBASE acronym: Asp221
Org_num: 6490
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | type I site-specific deoxyribonuclease, HsdR family | Asp221ORFAP | |
| ??? | M | M.Afe4253ORFDP (36% identity) | M.Asp221ORFEP | |
| ??? | M | M.AfeBORF2003P (75% identity) | M.Asp221ORFGP | |
| ??? | M | N-6 DNA methylase | M.Asp221ORFKP | |
| ??? | S | S.Afe4253ORFCP (81% identity) | S.Asp221ORFKP | |
| ??? | R | AfeYQN3ORF4390P (80% identity) | Asp221ORFLP | |
| ??? | M | adenine specific DNA-methyltransferase | M.Asp221ORFMP | |
| ??? | hypothetical protein | |||
| ??? | M | N-6 DNA methylase | M.Asp221ORFMP | |
| ??? | R | type I site-specific deoxyribonuclease, HsdR family | Asp221ORFQP | |
| ??? | S | S.AfeYQN3ORF3730P (62% identity) | S.Asp221ORFSP | |
| ??? | M | M.Pno1341ORFCP (75% identity) | M.Asp221ORFSP | |
| ??? | R | AfeYQN3ORF3730P (71% identity) | Asp221ORFSP | |
| ??? | R | type I site-specific deoxyribonuclease, HsdR family | Asp221ORFTP | |
| ??? | S | S.AfeYQN3ORF10580P (84% identity) | S.Asp221ORFTP | |
| ??? | M | M.AfeYQN3ORF4390P (61% identity) | M.Asp221ORFUP | |
| ??? | M | type I restriction-modification system, M subunit | M.Asp221ORFVP | |
| ??? | S | S.AfeAORF1577P (87% identity) | S.Asp221ORFVP | |
| ??? | R | hypothetical protein | Asp221ORFWP | |
| ??? | R | AfeBYMORF3215P (27% identity) | Asp221ORFXP | |
| ??? | M | type I restriction-modification system, M subunit | M.Asp221ORFZP | |
| ??? | M | N-6 DNA methylase | M.Asp221ORFA1P | |
| ??? | S | S.AfeYL25ORF1485P (30% identity) | S.Asp221ORFA1P | |
| ??? | R | AfeBYMORF3215P (39% identity) | Asp221ORFA1P | |
| ??? | S | S.AfeYQN3ORF4390P (93% identity) | S.Asp221ORFC1P | |
| ??? | M | M.AspAMDII (43% identity) | M.Asp221ORFG1P | |
| ??? | M | type I restriction-modification system, M subunit | M.Asp221ORFJ1P | |
| ??? | M | M.AthA01ORFIP (56% identity) | M.Asp221ORFM1P | |
| ??? | M | M.AfeBYMORF13885P (15% identity) | M.Asp221ORFN1P | |
| ??? | R | AfeBYMORF13885P (29% identity) | Asp221ORFQ1P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.Pth35ORF560P (45% identity) | TGGCCA | M.Asp221ORFHP |
| ??? | M | M.Afe6S08ORF1185P (81% identity) | M.Asp221ORFOP | |
| ??? | M | M.AfeAORF1568P (100% identity) | TGGCCA | M.Asp221ORFPP |
| ??? | M | hypothetical protein | AAGCTT | M.Asp221ORFD1P |
| ??? | M | M.AspYTS05ORF12850P (95% identity) | TGGCCA | M.Asp221ORFE1P |
| ??? | M | C-5 cytosine-specific DNA methylase | M.Asp221ORFH1P | |
| ??? | M | M.AthA01ORFMP (78% identity) | TGGCCA | M.Asp221ORFL1P |
| ??? | M | M.Aal14366ORFCP (77% identity) | M.Asp221ORFO1P | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | Site-specific DNA-methyltransferase | M.Asp221ORFBP | |
| ??? | M | M.XarXcp1ORF11700P (30% identity) | M.Asp221ORFCP | |
| ??? | M | hypothetical protein | M.Asp221ORFDP | |
| ??? | R | XtrP2541ORF18650P (55% identity) | Asp221ORFDP | |
| ??? | M | M.MspLW13ORFMP (38% identity) | M.Asp221ORFIP | |
| ??? | R | Nba67ORF1470P (26% identity) | Asp221ORFNP | |
| ??? | R | SspF21ORF8510P (35% identity) | Asp221ORFF1P | |
| ??? | M | M.TsyCad16ORFLP (36% identity) | M.Asp221ORFK1P | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | AfeBMrrP (84% identity) | Asp221MrrP | |