Salmonella enterica subsp. enterica USDA-ARS-USMARC-60984 |
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Putative Salmonella enterica subsp. enterica USDA-ARS-USMARC-60984 RM systems
Ref: Nguyen,S.V. et al. unpublished
REBASE ref # 28403
| Sequence length: | GenBank #: | |
| Chromosome: | 4,622,297 bp | CP025276 |
| plasmid pSJO-60984: | 266,480 bp | CP025277 |
REBASE acronym: Sen60984
Org_num: 33871
All begin CXR17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20425 | type IV toxin-antitoxin system YeeU family | |||
| 20430 | M | M1.SenSmo02ORF2465P (100% identity) | GNNTAYNNNNNRTGG | M.Sen60984ORF20430P |
| 20435 | S | S1.SenSmo02ORF2465P (98% identity) | GNNTAYNNNNNRTGG | S.Sen60984ORF20430P |
| 20440 | DUF262 domain-containing protein | |||
| 20445 | DUF262 domain-containing protein | |||
| 20450 | R | SenSmo02ORF2465P (100% identity) | GNNTAYNNNNNRTGG | Sen60984ORF20430P |
| 20455 | M48 family peptidase | |||
| 20455 | M48 family peptidase | |||
| 20460 | M | M.SenSmo02ORF2495P (100% identity) | M.Sen60984ORF20460P | |
| 20465 | S | S.SenSmo02ORF2495P (100% identity) | S.Sen60984ORF20460P | |
| 20470 | 0 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1935 | cell division protein DamX | |||
| 1940 | M | M.StyTDamP (100% identity) | GATC | M.Sen60984DamP |
| 1945 | ribulose-phosphate 3-epimerase | |||
| 2440 | DUF2556 domain-containing protein | |||
| 2445 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen60984ORF2445P |
| 2450 | Fis family transcriptional regulator | |||
| 5795 | 174 aa hypothetical protein | |||
| 5800 | M | M.SenST203ORF14210P (100% identity) | M.Sen60984ORF5800P | |
| 5805 | RusA family crossover junction | |||
| 7390 | DUF550 domain-containing protein | |||
| 7395 | M | M.Sen9981ORF7135P (100% identity) | M.Sen60984ORF7395P | |
| 7400 | 0 aa hypothetical protein | |||
| 9665 | phosphohydrolase | |||
| 9670 | M | M.SenST203DcmP (100% identity) | CCWGG | M.Sen60984DcmP |
| 9675 | V | V.StyUK1DcmP (100% identity) | V.Sen60984DcmP | |
| 9680 | drug/metabolite exporter YedA | |||
| 15415 | replication endonuclease | |||
| 15420 | M | M.SenST203ORF4380P (100% identity) | M.Sen60984ORF15420P | |
| 15425 | DUF2732 domain-containing protein | |||
| 22610 | transcriptional regulator | |||
| 22615 | M | M.SenST203ORF20920P (100% identity) | M.Sen60984ORF22615P | |
| 22620 | 66 aa hypothetical protein | |||
| 22625 | replication endonuclease | |||
| 22630 | M | M.SenST203ORF20905P (100% identity) | M.Sen60984ORF22630P | |
| 22635 | 75 aa hypothetical protein | |||
| 22635 | 75 aa hypothetical protein | |||
| 22640 | M | M.SenST203ORF20895P (100% identity) | M.Sen60984ORF22640P | |
| 22645 | 127 aa hypothetical protein | |||
| plasmid pSJO-60984 | ||||
| 24415 | DUF1173 domain-containing protein | |||
| 24420 | M | M.Ssp15303DcmP (100% identity) | M.Sen60984Dcm2P | |
| 24425 | nuclease | |||
| 24915 | 106 aa hypothetical protein | |||
| 24920 | M | M.SmapR478ORF272P (100% identity) | M.Sen60984ORF24920P | |
| 24925 | 202 aa hypothetical protein | |||
| 25050 | DNA-binding protein | |||
| 25055 | M | M.Ssp15303ORFEP (100% identity) | M.Sen60984ORF25055P | |
| 25060 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17880 | 33 aa hypothetical protein | |||
| 17885 | R | Sens30601ORF17060P (100% identity) | CAGAG | Sen60984ORF17890P |
| 17890 | M | M.Sens679ORF16435P (100% identity) | CAGAG | M.Sen60984ORF17890P |
| 17895 | MFS transporter | |||