Salmonella enterica subsp. enterica serovar Newport USDA-ARS-USMARC-1923 |
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Putative Salmonella enterica subsp. enterica serovar Newport USDA-ARS-USMARC-1923 RM systems
Ref: Nguyen,S.V. et al. unpublished
REBASE ref # 26431
| Sequence length: | GenBank #: | |
| Chromosome: | 4,899,128 bp | CP025273 |
| plasmid pSNE1-1923: | 6,761 bp | CP025274 |
REBASE acronym: Sen1923
Org_num: 33873
All begin AW79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21770 | 322 aa hypothetical protein | |||
| 21775 | R | Spy5740IP (100% identity) | GACNNNNNNNRTCC | Sen1923ORF21780P |
| 21780 | M | M.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | M.Sen1923ORF21780P |
| 21785 | S | S.SenS224ORF19910P (100% identity) | GACNNNNNNNRTCC | S.Sen1923ORF21780P |
| 21790 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1995 | cell division protein DamX | |||
| 2000 | M | adenine-specific DNA-methyltransferase | GATC | M.Sen1923DamP |
| 2005 | ribulose-phosphate 3-epimerase | |||
| 2500 | DUF2556 domain-containing protein | |||
| 2505 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen1923ORF2505P |
| 2510 | Fis family transcriptional regulator | |||
| 3415 | DUF2732 domain-containing protein | |||
| 3420 | M | M.SensSZL38ORF19965P (100% identity) | M.Sen1923ORF3420P | |
| 3425 | replication endonuclease | |||
| 6220 | 75 aa hypothetical protein | |||
| 6225 | M | M.SenSH7ORF6070P (100% identity) | M.Sen1923ORF6225P | |
| 6230 | replication endonuclease | |||
| 6240 | 62 aa hypothetical protein | |||
| 6245 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.Sen1923ORF6245P |
| 6250 | R | SenS16ORF16875P (100% identity) | CGGCCG | Sen1923ORF6245P |
| 6255 | phage portal protein | |||
| 10230 | phosphohydrolase | |||
| 10235 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.Sen1923DcmP |
| 10240 | V | V.StyTDcmP (100% identity) | V.Sen1923DcmP | |
| 10245 | drug/metabolite exporter YedA | |||
| 15380 | methyltransferase | |||
| 15385 | M | M.Sens29945ORF7970P (100% identity) | M.Sen1923ORF15385P | |
| 15390 | 82 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19440 | 33 aa hypothetical protein | |||
| 19445 | R | Ssp6947IIP (100% identity) | CAGAG | Sen1923ORF19450P |
| 19450 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.Sen1923ORF19450P |
| 19455 | MFS transporter | |||
| plasmid pSNE1-1923 | ||||
| 25345 | plasmid replication initiation protein | |||
| 25350 | R | Sen7230ORF24715P (99% identity) | Sen1923ORF25355P | |
| 25355 | M | M.Sen7230ORF24715P (100% identity) | M.Sen1923ORF25355P | |