Streptomonospora species M2 |
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Putative Streptomonospora species M2 RM systems
Ref: Khodamoradi,S. et al. unpublished
REBASE ref # 28407
| Sequence length: | GenBank #: | |
| Chromosome: | 5,724,192 bp | CP036455 |
| plasmid phiM2: | 89,998 bp | CP036456 |
REBASE acronym: Ssp106425
Org_num: 33880
All begin EKD16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20000 | Abi-like protein | |||
| 20005 | M | M.Gfu49117ORF23335P (37% identity) | M.Ssp106425ORF20005P | |
| 20010 | S | S.Gfu49117ORF23335P (55% identity) | S.Ssp106425ORF20005P | |
| 20015 | Transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6390 | Bacitracin export ATP-binding protein BceA | |||
| 6395 | RM | SspCL7ORF29285P (53% identity) | Ssp106425ORF6395P | |
| 6400 | 111 aa hypothetical protein | |||
| 8240 | 98 aa hypothetical protein | |||
| 8245 | M | M.Ngi90087ORF245P (76% identity) | M.Ssp106425ORF8245P | |
| 8250 | Helix-turn-helix domain protein | |||
| 9330 | Serine/threonine-protein kinase PrkC | |||
| 9335 | M | M.Tha44931ORF17525P (28% identity) | M.Ssp106425ORF9335P | |
| 9340 | 306 aa hypothetical protein | |||
| 12935 | RNA polymerase-associated protein RapA | |||
| 12940 | RM | SspTN58ORF25925P (44% identity) | Ssp106425ORF12940P | |
| 12945 | 63 aa hypothetical protein | |||
| 21970 | 1266 aa hypothetical protein | |||
| 21975 | RM | SruAM16ORFDP (68% identity) | Ssp106425ORF21975P | |
| 21980 | RNA polymerase-associated protein RapA | |||
| 22680 | 72 aa hypothetical protein | |||
| 22685 | V | V.KseKMORF57860P (67% identity) | V.Ssp106425ORF22690P | |
| 22690 | M | M.Ssp885ORF24575P (49% identity) | M.Ssp106425ORF22690P | |
| 22695 | 303 aa hypothetical protein | |||
| 23605 | 63 aa hypothetical protein | |||
| 23610 | RM | MchM01ORF5530P (48% identity) | Ssp106425ORF23610P | |
| 23615 | RNA polymerase-associated protein RapA | |||
| plasmid phiM2 | ||||
| 25585 | 187 aa hypothetical protein | |||
| 25590 | M | M.SspXY006ORF10435P (71% identity) | M.Ssp106425ORF25590P | |
| 25595 | 143 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12995 | 408 aa hypothetical protein | |||
| 13000 | R | Nsp01McrBP (51% identity) | Ssp106425McrBP | |
| 13005 | R | Nsp01McrCP (51% identity) | Ssp106425McrCP | |
| 13010 | ATP-dependent DNA helicase YjcD | |||