Litorilituus sediminis JCM 17549 |
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Putative Litorilituus sediminis JCM 17549 RM systems
Ref: Liu,A. and Rong,J. unpublished
REBASE ref # 28391
Complete sequence: 4,275,717 bp
GenBank #: CP034759
REBASE acronym: Lse17549
Org_num: 33855
All begin EMK97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3065 | restriction endonuclease | |||
| 3070 | R | PspPLSVORFDP (77% identity) | Lse17549ORF3095P | |
| 3075 | 464 aa hypothetical protein | |||
| 3080 | DNA helicase | |||
| 3085 | RNA-directed DNA polymerase | |||
| 3090 | S | S.NpeLFT18ORFDP (32% identity) | S.Lse17549ORF3095P | |
| 3095 | M | M.AspMex14ORF4475P (85% identity) | M.Lse17549ORF3095P | |
| 3100 | 118 aa hypothetical protein | |||
| 4790 | DUF262 domain-containing protein | |||
| 4795 | R | Asp11495ORF15660P (86% identity) | Lse17549ORF4805P | |
| 4800 | S | S.Vhafi2ORFFP (42% identity) | S.Lse17549ORF4805P | |
| 4805 | M | M.Asp161ORF2140P (81% identity) | M.Lse17549ORF4805P | |
| 4810 | WYL domain-containing protein | |||
| 9635 | site-specific integrase | |||
| 9640 | M | M.Asp43554ORF50025P (93% identity) | M.Lse17549ORF9640P | |
| 9645 | Abi family protein | |||
| 9650 | S | S.Asp43554ORF50025P (51% identity) | S1.Lse17549ORF9640P | |
| 9655 | IS3 family transposase | |||
| 9660 | S | S.Asp43554ORF50025P (46% identity) | S2.Lse17549ORF9640P | |
| 9665 | FRG domain-containing protein | |||
| 9670 | R | Asp43554ORF50025P (95% identity) | Lse17549ORF9640P | |
| 9675 | 271 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10630 | DUF2237 domain-containing protein | |||
| 10635 | M | M.Vch19226ORF783P (74% identity) | M.Lse17549ORF10635P | |
| 10640 | R | PstP111ORF1272P (73% identity) | Lse17549ORF10635P | |
| 10645 | NAD(P)/FAD-dependent oxidoreductase | |||
| 16655 | BREX system P-loop protein BrxC | |||
| 16660 | RM | PflJG1ORFEP (61% identity) | Lse17549ORF16660P | |
| 16665 | BREX-1 system phosphatase PglZ type A | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16670 | BREX system Lon protease-like protein BrxL | |||
| 16675 | R | TspPS06McrBP (72% identity) | Lse17549McrBP | |
| 16680 | R | TspPS06McrCP (90% identity) | Lse17549McrCP | |
| 16685 | DUF2130 domain-containing protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9120 | DUF2970 domain-containing protein | |||
| 9125 | M | M.Tac106ORF13210P (84% identity) | M.Lse17549ORF9125P | |
| 9130 | 461 aa hypothetical protein | |||