[Clostridium] scindens ATCC 35704 |
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Putative [Clostridium] scindens ATCC 35704 RM systems
Ref: Devendran,S. et al. Appl. Environ. Microbiol. (2019) In press
REBASE ref # 28415
Complete sequence: 3,658,040 bp
GenBank #: CP036170
REBASE acronym: Csc35704
Org_num: 17377
All begin HDCHBGLK_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1817 | 159 aa hypothetical protein | |||
| 1818 | R | CscSt60ORF6350P (100% identity) | Csc35704ORF1819P | |
| ??? | M | M.CscSt60ORF6350P (100% identity) | M.Csc35704ORF1819P | |
| 1821 | S | S.CscSt60ORF6350P (100% identity) | S.Csc35704ORF1819P | |
| 1822 | 185 aa hypothetical protein | |||
| 2534 | 65 aa hypothetical protein | |||
| 2535 | M | M.CscSt60ORF14350P (100% identity) | CNRTANNNNNNNTCNNC | M.Csc35704II |
| 2536 | S | S.CscSt60ORF14350P (100% identity) | CNRTANNNNNNNTCNNC | S.Csc35704II |
| 2537 | R | CscSt60ORF14350P (100% identity) | CNRTANNNNNNNTCNNC | Csc35704IIP |
| 2538 | 851 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 311 | 228 aa hypothetical protein | |||
| 312 | M | M1.Csc1227ORF13840P (100% identity) | M.Csc35704ORF312P | |
| 313 | 52 aa hypothetical protein | |||
| 314 | 74 aa hypothetical protein | |||
| 315 | M | M2.Csc1227ORF13840P (100% identity) | M.Csc35704ORF315P | |
| 316 | 60 aa hypothetical protein | |||
| 737 | 670 aa hypothetical protein | |||
| 738 | M | M.CscSt60ORF32210P (100% identity) | GGATC | M.Csc35704I |
| 739 | 72 aa hypothetical protein | |||
| 739 | 72 aa hypothetical protein | |||
| 740 | M | M.CscSt60ORF32230P (100% identity) | M.Csc35704ORF740P | |
| 741 | 116 aa hypothetical protein | |||
| 1077 | 446 aa hypothetical protein | |||
| 1078 | M | M.Csc1227ORF17685P (100% identity) | M.Csc35704ORF1078P | |
| 1079 | 783 aa hypothetical protein | |||
| 1078 | Modification methylase FokI | |||
| 1079 | RM | Csc1227ORF17690P (100% identity) | Csc35704ORF1079P | |
| 1080 | DNA replication and repair protein RecF | |||
| 1099 | 134 aa hypothetical protein | |||
| 1100 | M | M.Csc1227ORF17800P (93% identity) | M.Csc35704ORF1100P | |
| 1101 | 777 aa hypothetical protein | |||
| 1133 | 812 aa hypothetical protein | |||
| 1134 | M | M.Sin30303ORF6845P (100% identity) | CCSSGG | M.Csc35704ORF1134P |
| 1135 | 689 aa hypothetical protein | |||
| 1928 | Molybdopterin molybdenumtransferase | |||
| 1929 | M | M.CscWT3DORFEP (100% identity) | M.Csc35704ORF1929P | |
| 1930 | R | CscSt60ORF7470P (100% identity) | Csc35704ORF1929P | |
| 1931 | V | V.CscWT3DORFGP (100% identity) | V.Csc35704ORF1929P | |
| 1932 | DegV domain-containing protein | |||
| 2061 | 53 aa hypothetical protein | |||
| 2062 | M | M.Csc1227ORF4165P (89% identity) | M.Csc35704ORF2062P | |
| 2063 | 104 aa hypothetical protein | |||
| 2071 | 92 aa hypothetical protein | |||
| 2072 | M | M.Csc1227ORF4215P (100% identity) | M.Csc35704ORF2072P | |
| 2073 | 131 aa hypothetical protein | |||
| 2573 | 52 aa hypothetical protein | |||
| 2574 | M | M.Csc1227ORF6650P (100% identity) | M.Csc35704ORF2574P | |
| 2575 | 280 aa hypothetical protein | |||
| 2967 | 98 aa hypothetical protein | |||
| 2968 | M | M.Csc1227ORF8615P (100% identity) | M.Csc35704ORF2968P | |
| 2969 | 60 aa hypothetical protein | |||
| 2971 | 33 aa hypothetical protein | |||
| ??? | M | M.Csc1227ORF8630P (100% identity) | M.Csc35704ORF2972P | |
| 2973 | 73 aa hypothetical protein | |||
| 3506 | 805 aa hypothetical protein | |||
| 3507 | M | M.Csc1227ORF11320P (100% identity) | M.Csc35704ORF3507P | |
| 3508 | 702 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1814 | 1229 aa hypothetical protein | |||
| 1815 | R | CscSt60McrBP (100% identity) | Csc35704McrBP | |
| 1816 | R | CscSt60McrCP (100% identity) | Csc35704McrCP | |
| 1817 | 159 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2975 | 55 aa hypothetical protein | |||
| 2976 | M | M.Csc1227ORF8650P (100% identity) | M.Csc35704ORF2976P | |
| 2977 | 121 aa hypothetical protein | |||