Salmonella enterica subsp. enterica serovar Heidelberg C_NS-005 |
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Putative Salmonella enterica subsp. enterica serovar Heidelberg C_NS-005 RM systems
Ref: Deblais,L. et al. unpublished
REBASE ref # 28192
Contig set: 4,778,749 bp
GenBank #: PGWK00000000 (NZ_PGWK00000000)
REBASE acronym: SenNS005
Org_num: 33696
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 147 | 93 aa hypothetical protein | |||
| 148 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenNS005ORFEP |
| 151 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.SenNS005ORFEP |
| 155 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenNS005ORFEP |
| 162 | 104 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20 | 102 aa hypothetical protein | |||
| 23 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenNS005ORFCP |
| 25 | tRNA-dihydrouridine synthase B | |||
| 51 | DUF1998 domain-containing protein | |||
| 56 | RM | Sens12373ORF19575P (100% identity) | GATCAG | SenNS005ORFDP |
| 62 | 151 aa hypothetical protein | |||
| 108 | DNA adenine methylase | |||
| 111 | M | M.StyTDamP (100% identity) | GATC | M.SenNS005DamP |
| 112 | DamX protein | |||
| 163 | 79 aa hypothetical protein | |||
| 164 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.SenNS005ORFAP |
| 165 | exonuclease | |||
| 1908 | DMT superfamily transporter inner membrane protein | |||
| 1909 | V | V.StyTDcmP (100% identity) | V.SenNS005DcmP | |
| 1910 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.SenNS005DcmP |
| 1912 | Uncharacterised protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 79 | metabolite transport protein | |||
| 81 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.SenNS005ORFBP |
| 82 | R | SenNS033ORFAP (100% identity) | CAGAG | SenNS005ORFBP |
| 84 | 71 aa hypothetical protein SEHO0A_00325 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 161 | Uncharacterised protein | |||
| 163 | R | StyUK1MrrP (100% identity) | SenNS005MrrP | |
| 164 | 62 aa hypothetical protein | |||