Vibrio parahaemolyticus D3112 |
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Putative Vibrio parahaemolyticus D3112 RM systems
Ref: Li,Y. unpublished
REBASE ref # 24350
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,239,077 bp | CP034565 |
| chromosome 2: | 1,886,547 bp | CP034566 |
REBASE acronym: Vpa3112
Org_num: 33683
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| ??? | restriction endonuclease | |||
| ??? | R | VpaLVP1ORF2290P (100% identity) | Vpa3112ORFAP | |
| ??? | S | S.VpaLVP1ORF2290P (99% identity) | S.Vpa3112ORFAP | |
| ??? | M | M.VpaLVP1ORF2290P (100% identity) | M.Vpa3112ORFAP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| ??? | M | M.VphVPD14DamP (100% identity) | GATC | M.Vpa3112DamP |
| ??? | R | ValYM4DptFP (98% identity) | Vpa3112DptFP | |
| ??? | DNA phosphorothioation-dependent restriction protein DptG | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptF | |||
| ??? | R | Vsp9026DptGP (98% identity) | Vpa3112DptGP | |
| ??? | cell division protein FtsK | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptG | |||
| ??? | R | Vsp9026DptHP (97% identity) | Vpa3112DptHP | |
| ??? | DNA sulfur modification protein DndE | |||
| ??? | cell division protein FtsK | |||
| ??? | M | M.Val9901DndEP (100% identity) | M.Vpa3112DndEP | |
| ??? | DNA sulfur modification protein DndD | |||
| ??? | DNA sulfur modification protein DndE | |||
| ??? | M | M.Val9901DndDP (100% identity) | M.Vpa3112DndDP | |
| ??? | 543 aa hypothetical protein | |||
| ??? | DNA sulfur modification protein DndD | |||
| ??? | M | M.Val9901DndCP (99% identity) | M.Vpa3112DndCP | |
| ??? | DNA sulfur modification protein DndB | |||
| ??? | 543 aa hypothetical protein | |||
| ??? | M | M.Vsp9026DndBP (100% identity) | M.Vpa3112DndBP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| ??? | R | VpaBM26AMrrP (100% identity) | Vpa3112MrrP | |
| ??? | DEAD/DEAH box helicase | |||