Lactobacillus paracasei SRCM103299 |
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Putative Lactobacillus paracasei SRCM103299 RM systems
Ref: Lee,J.H. et al. unpublished
REBASE ref # 28149
| Sequence length: | GenBank #: | |
| Chromosome: | 3,081,420 bp | CP035563 |
| plasmid unnamed1: | 67,627 bp | CP035564 |
REBASE acronym: Lpa3299
Org_num: 33610
All begin EVE90_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3095 | 65 aa hypothetical protein | |||
| 3100 | S | S.Lpa21731ORF2695P (48% identity) | S2.Lpa3299ORF3080P | |
| 3105 | IS30 family transposase | |||
| 3110 | S | S.LplV38ORF14645P (43% identity) | S1.Lpa3299ORF3080P | |
| 3115 | M | M.LpaNSMJ16ORF12070P (98% identity) | M.Lpa3299ORF3080P | |
| 3120 | R | Lpa21731ORF2695P (98% identity) | Lpa3299ORF3080P | |
| 3125 | 0 aa hypothetical protein | |||
| 11485 | 268 aa hypothetical protein | |||
| 11490 | S | S2.LpaHM1ORF9300P (99% identity) | S2.Lpa3299ORF11505P | |
| 11495 | site-specific integrase | |||
| 11500 | S | S1.LpaNC4ORF1910P (54% identity) | S1.Lpa3299ORF11505P | |
| 11505 | M | M.LpaTD062ORF4065P (99% identity) | M.Lpa3299ORF11505P | |
| 11510 | R | LpaL9ORF2187P (100% identity) | Lpa3299ORF11505P | |
| 11515 | 188 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 16205 | IS5 family transposase | |||
| 16210 | S | S.Cdi1505ORF90022P (35% identity) | S.Lpa3299ORF16215P | |
| 16215 | M | M.Lbr521I (99% identity) | M.Lpa3299ORF16215P | |
| 16220 | R | Lba1988IIP (99% identity) | Lpa3299ORF16215P | |
| 16225 | 120 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10810 | 90 aa hypothetical protein | |||
| 10815 | M | M.LspDS16ORF7400P (100% identity) | M.Lpa3299ORF10815P | |
| 10820 | restriction endonuclease | |||
| 10815 | DNA methyltransferase | |||
| 10820 | RM | LspDS16ORF7395P (100% identity) | Lpa3299ORF10820P | |
| 10825 | RNA-directed DNA polymerase | |||