Helicobacter pylori HP14039 |
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Putative Helicobacter pylori HP14039 RM systems
Ref: Lamichhane,B. et al. unpublished
REBASE ref # 28288
Complete sequence: 1,678,260 bp
GenBank #: CP034147
REBASE acronym: Hpy14039
Org_num: 33591
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | HpyNG06ORF7390P (96% identity) | Hpy14039ORFCP | |
| ??? | M | M.HpyC008ORF7295P (94% identity) | M.Hpy14039ORFCP | |
| ??? | S | S.HpyU101XIII (97% identity) | S.Hpy14039ORFCP | |
| ??? | M | M.Hpy13345ORF989P (93% identity) | M.Hpy14039ORFHP | |
| ??? | S | S.Hpyfe28ORF4265P (93% identity) | S.Hpy14039ORFHP | |
| ??? | R | HpyMA07ORF2520P (96% identity) | Hpy14039ORFHP | |
| ??? | S | S.HpySP321ORF3935P (96% identity) | S.Hpy14039ORFRP | |
| ??? | R | HpyKE21ORF6240P (93% identity) | Hpy14039ORFLP | |
| ??? | M | M.HpyBR18ORF2165P (95% identity) | M.Hpy14039ORFLP | |
| ??? | S | S.HpySP101ORF4085P (97% identity) | S.Hpy14039ORFLP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HpyBR14VI (97% identity) | GATC | M.Hpy14039ORFAP |
| ??? | R | Hpy13ORF495P (97% identity) | GATC | Hpy14039ORFAP |
| ??? | M | M.HpySW05VII (98% identity) | M.Hpy14039ORFA1P | |
| ??? | R | HpyLI01VIIIP (98% identity) | Hpy14039ORFA1P | |
| ??? | DNA cytosine methyltransferase | |||
| ??? | R | HpyKE21ORF2430P (42% identity) | CCTC | Hpy14039ORFB1P |
| ??? | M | M1.HpySP322VI (97% identity) | CCTC | M.Hpy14039ORFB1P |
| ??? | R | HpySP307XIIP (98% identity) | TGCA | Hpy14039ORFBP |
| ??? | M | M.HpyJO8XIV (96% identity) | TGCA | M.Hpy14039ORFBP |
| ??? | S | S.HpyGCT85ORFJP (66% identity) | S.Hpy14039ORFDP | |
| ??? | RM | HpyU416ORF7330P (98% identity) | Hpy14039ORFDP | |
| ??? | M | M2.HpyID1III (98% identity) | M1.Hpy14039ORFZP | |
| ??? | M | M1.Hpy3192ORF150P (99% identity) | CCATC | M2.Hpy14039ORFZP |
| ??? | R | HpySWT10IVP (97% identity) | CCATC | Hpy14039ORFZP |
| ??? | RM | HpyCO7ORF6860P (78% identity) | Hpy14039ORFXP | |
| ??? | 969 aa hypothetical protein | |||
| ??? | hypothetical protein | |||
| ??? | M | M.HpyKH41ORFPP (99% identity) | M.Hpy14039ORFVP | |
| ??? | R | HpyNP10ORF6580P (96% identity) | Hpy14039ORFVP | |
| ??? | RM | HpySP105ORF6250P (86% identity) | Hpy14039ORFUP | |
| ??? | site-specific DNA-methyltransferase | |||
| ??? | R | Hpy280AORFUP (93% identity) | Hpy14039ORFTP | |
| ??? | M | M.HpyI009I (95% identity) | M.Hpy14039ORFTP | |
| ??? | M | M.HpyPE140XVI (95% identity) | GCGC | M.Hpy14039ORFFP |
| ??? | R | HpyH006ORF5175P (100% identity) | TCNNGA | Hpy14039ORFSP |
| ??? | M | M.HpyCOL119XI (98% identity) | TCNNGA | M.Hpy14039ORFSP |
| ??? | M | M.HpyCO2XIII (92% identity) | GTNNAC | M.Hpy14039ORFGP |
| ??? | R | HpyT006ORF4315P (94% identity) | GTNNAC | Hpy14039ORFGP |
| ??? | RM | HpyH002ORF3305P (56% identity) | Hpy14039ORFQBP | |
| ??? | RM | DEAD/DEAH box helicase | Hpy14039ORFQAP | |
| ??? | R | HpyKH38ORFRP (95% identity) | GTAC | Hpy14039ORFPP |
| ??? | M | M.HpyGCT27ORF1545P (96% identity) | GTAC | M.Hpy14039ORFPP |
| ??? | R | HpyT016ORF2465P (99% identity) | ACGT | Hpy14039ORFMP |
| ??? | M | M.HpyKH27ORFB1P (98% identity) | ACGT | M.Hpy14039ORFMP |
| ??? | GIY-YIG nuclease family protein | |||
| ??? | DNA cytosine methyltransferase | |||
| ??? | R | GIY-YIG nuclease family protein | ACNGT | Hpy14039ORFNP |
| ??? | M | M.HpySP710II (96% identity) | ACNGT | M.Hpy14039ORFNP |
| ??? | modification methylase VspI domain protein | |||
| ??? | modification methylase VspI domain protein | |||
| ??? | M | M.HpyR01II (96% identity) | ATTAAT | M.Hpy14039ORFOP |
| ??? | M | M.HpySW22V (98% identity) | CTNAG | M.Hpy14039ORFIP |
| ??? | R | Hpy478AORFFP (98% identity) | CTNAG | Hpy14039ORFIP |
| ??? | M | M.HpyMT5136III (100% identity) | CCGG | M.Hpy14039ORFJP |
| ??? | R | Hpy381FORFFP (95% identity) | CCGG | Hpy14039ORFJP |
| ??? | hypothetical protein | |||
| ??? | 212 aa hypothetical protein HMPREF1415_00409 | |||
| ??? | M | M.HpyG63ORFLP (96% identity) | M.Hpy14039ORFKP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | hypothetical protein | |||
| ??? | R | Hpy9310ORFOP (96% identity) | Hpy14039ORFYP | |
| ??? | M | M.HpyJ001ORF7055P (94% identity) | M.Hpy14039ORFYP | |
| ??? | R | HpySP505ORF6705P (90% identity) | Hpy14039ORFEP | |
| ??? | M | M.HpySP406ORF6475P (95% identity) | M.Hpy14039ORFEP | |
| ??? | M | M.HpyMA07ORF3900P (53% identity) | M.Hpy14039ORFWP | |