Xanthomonas oryzae pv. oryzae PXO142 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Xanthomonas oryzae pv. oryzae PXO142 RM systems
Ref: Grau,J. et al. unpublished
REBASE ref # 28285
Complete sequence: 4,982,118 bp
GenBank #: CP031698
REBASE acronym: Xor142
Org_num: 33588
All begin DZA55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3760 | type II toxin-antitoxin system RelE/ParE family | |||
| 3765 | S | S.XorPXO61ORF18415P (100% identity) | S.Xor142ORF3770P | |
| 3770 | M | M.XorZ173ORF6395P (100% identity) | M.Xor142ORF3770P | |
| 3775 | Abi family protein | |||
| 3780 | R | XorPXO61ORF18415P (100% identity) | Xor142ORF3770P | |
| 3785 | 0 aa hypothetical protein | |||
| ??? | restriction endonuclease | |||
| 3800 | M | M.XorPXO61ORF18385P (100% identity) | M.Xor142ORF3800P | |
| 3805 | 144 aa hypothetical protein | |||
| 3810 | S | S.XorPXO61ORF18385P (60% identity) | S1.Xor142ORF3800P | |
| ??? | S | S.XorMORF3262AP (100% identity) | S2.Xor142ORF3800P | |
| 3820 | 248 aa hypothetical protein | |||
| 3825 | 224 aa hypothetical protein | |||
| 3830 | R | XorPXO61ORF18385P (100% identity) | Xor142ORF3800P | |
| 3835 | 88 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1105 | lipoyl synthase | |||
| 1110 | M | M.XorZ173ORF3935P (100% identity) | CTGCAG | M.Xor142ORF1110P |
| 1115 | R | XorYC11ORF20530P (100% identity) | CTGCAG | Xor142ORF1110P |
| 1120 | PDZ domain-containing protein | |||
| 10760 | DEAD/DEAH box helicase | |||
| 10765 | RM | CbaKF708ORFDP (98% identity) | Xor142ORF10765P | |
| 10770 | DNA-binding protein | |||
| 18940 | integrase | |||
| 18945 | R | XorPXO61ORF3170P (100% identity) | CGATCG | Xor142ORF18900P |
| 18950 | M | M.XorPXO61ORF3170P (100% identity) | CGATCG | M.Xor142ORF18900P |
| 18955 | V | V.XorPXO61ORF3170P (100% identity) | V.Xor142ORF18900P | |
| 18960 | plasmid mobilization relaxosome protein MobC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22470 | Fic family protein | |||
| 22475 | M | M.XorZ173ORF2630P (100% identity) | CCGAGG | M.Xor142ORF22475P |
| 22480 | R | XorYcbORF21955P (100% identity) | CCGAGG | Xor142ORF22475P |
| 22485 | alpha/beta fold hydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3790 | type II toxin-antitoxin system RelE/ParE family | |||
| ??? | R | XorZ173MrrP (100% identity) | Xor142MrrP | |
| 3800 | SAM-dependent DNA methyltransferase | |||